ID A0A1Q9GXA8_9GAMM Unreviewed; 679 AA.
AC A0A1Q9GXA8;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE SubName: Full=C-di-GMP phosphodiesterase {ECO:0000313|EMBL:OLQ79895.1};
GN ORFNames=BIT28_01180 {ECO:0000313|EMBL:OLQ79895.1};
OS Photobacterium proteolyticum.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Photobacterium.
OX NCBI_TaxID=1903952 {ECO:0000313|EMBL:OLQ79895.1, ECO:0000313|Proteomes:UP000186905};
RN [1] {ECO:0000313|EMBL:OLQ79895.1, ECO:0000313|Proteomes:UP000186905}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=13-12 {ECO:0000313|EMBL:OLQ79895.1,
RC ECO:0000313|Proteomes:UP000186905};
RA Li Y.;
RT "Photobacterium proteolyticum sp. nov. a protease producing bacterium
RT isolated from ocean sediments of Laizhou Bay.";
RL Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OLQ79895.1}.
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DR EMBL; MJIL01000048; OLQ79895.1; -; Genomic_DNA.
DR RefSeq; WP_075762513.1; NZ_MJIL01000048.1.
DR AlphaFoldDB; A0A1Q9GXA8; -.
DR STRING; 1903952.BIT28_01180; -.
DR OrthoDB; 1316910at2; -.
DR Proteomes; UP000186905; Unassembled WGS sequence.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR33121:SF72; BIFUNCTIONAL DIGUANYLATE CYCLASE WITH GAF AND PAS SENSORY DOMAINS/SIGNALLING PROTEIN WITH EAL DOMAIN; 1.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00091; PAS; 2.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000186905}.
FT DOMAIN 23..76
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 279..412
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 421..675
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 679 AA; 76566 MW; CD706957AEF6A496 CRC64;
MPTEQLNYWF PLLTDNSPFL FAVLDPDHNY LVVNNRYCEI SGLEREELVG QNDKDILGQA
FYDSLRPYYE RAFNGESVEG EVVLNDNRHD TSMHFSLAPL KDQVGDIPYI VLHSADTSER
QVLVNSLAEL EHQLNQLNEL ITDGSCLIEG EIIISANQTA ADMLGFESPR DLIGEELGRL
LIDSSSQRIL GEQINQLGKN EQRKCQTSPR CSTDKALQVS SSDITLLGAP AKLILLQDTS
ERAVQQGQVE LLVQTDPLTG LYNRHGFSRR LEQLINNESP LVMLYLDLDN FKNINDSLGH
HIGDRVLQEI SQRLRRLLPD TAIIGHLSGD EFAIILQEPE HDRSGELISQ QIIALINQPF
DLHHFSKHLA CSIGMVTYPG DGNDARILLQ NADTAMYEAK NRGRNRLVKF SEEMNKEARM
QLWLEIELQK ALQQNGLEVW YQPKVNAKDY AIDGAEALVR WKHPVEGYIS PAQFIPVAER
SGMIEQLGQV VIREVFTTVR KWKQQGLLSG RVAINLSPQQ FGNPNLISFV EKLKKATGVN
PNDITFELTE SAVMSDGEHT IQMLNAIKKQ GFALSIDDFG TGYSSLSYLA RFPLDELKID
RAFIKDIETI PKQVTLIENI INLGKALSMS IVAEGVETRQ QATLLSNLNC DYIQGFHFYK
PLPKNELDAI LLKHSRHKD
//