ID A0A1R1DYQ9_9BACL Unreviewed; 742 AA.
AC A0A1R1DYQ9;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=HTH araC/xylS-type domain-containing protein {ECO:0000259|PROSITE:PS01124};
GN ORFNames=BK138_34390 {ECO:0000313|EMBL:OMF44734.1};
OS Paenibacillus rhizosphaerae.
OC Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX NCBI_TaxID=297318 {ECO:0000313|EMBL:OMF44734.1, ECO:0000313|Proteomes:UP000187172};
RN [1] {ECO:0000313|EMBL:OMF44734.1, ECO:0000313|Proteomes:UP000187172}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FSL R5-0378 {ECO:0000313|EMBL:OMF44734.1,
RC ECO:0000313|Proteomes:UP000187172};
RA Beno S.M.;
RT "Paenibacillus species isolates.";
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMF44734.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; MRTP01000025; OMF44734.1; -; Genomic_DNA.
DR RefSeq; WP_076176895.1; NZ_MRTP01000025.1.
DR AlphaFoldDB; A0A1R1DYQ9; -.
DR STRING; 297318.BK138_34390; -.
DR Proteomes; UP000187172; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR041522; CdaR_GGDEF.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR43280; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43280:SF2; BIFUNCTIONAL TRANSCRIPTIONAL ACTIVATOR/DNA REPAIR ENZYME ADAA; 1.
DR Pfam; PF17853; GGDEF_2; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000187172};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..35
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 300..318
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 627..726
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 742 AA; 83138 MW; 4ED806A4098A491A CRC64;
MKKLPFYRDT FFSRLIVSYT ALAVVLLGLA GGYLYTQANR MMVDEIARDS RSRLETAKDY
VERTLLRKYE DQLQNKAVST VFIRDSSDLN VLLDNGWEGN LSRIAAFRQD LDMFKQVLEG
VSNVTVYFRQ GDYIVDSANF YAKTEHSGDA AFMKGLQRSD LNRWIVRELP KGTQALTYVV
NLPYGTLGNS PKGFLYIDVD MEYLERAVAS ILNSGSERLY IFNSSGQLIM QTAGATKEEM
VLLQRSIGQG TTGTEMSGNK TGTLVLSHLE GGRPGSGLTY AMIRPMDSFV LASKQLKAKI
FTGCGFVLML GLGISYLISK RFYLPMKRLV QHVRNLPGLN HMNTNEYQMI DSTLSFMGQK
ILNLESQAQQ NEMKHLLLGA SLGVERLDAL PRHCRYQVAH IQLVDGRSEQ LKIIDELGGH
HMPYELVILN PQESAIVFFM NEGGAVDEAA ALEPLARLQR ETGDGLRFGA GIGPPVQTIE
EIPLSYRLAH QAYRYRFIYG PEALVSHAQI ATLDPKPPSF PLEIFKNALK AGDVTRANRF
IDEVYAVLEQ RNLQLEAVEL ALLQMVSALY ESVIDLELQQ LVPPFDLFDE LKKDTLADTI
GSIRDLSERI GIHVRESGNH AHEEVILKLK AYIDEHLDED LSLNVLSEVA SLAPAYISTL
FGKVMNESFT EYVTRTRLKK AADMLLTQDN MSVSEIASLV GYRSIQYFHT KFKARYGVTP
VQYRQRKAAA GEGGKPASKQ PL
//