ID A0A1R3FV96_9ROSI Unreviewed; 427 AA.
AC A0A1R3FV96;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=GATA-type domain-containing protein {ECO:0000259|PROSITE:PS50114};
GN ORFNames=COLO4_38392 {ECO:0000313|EMBL:OMO49773.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMO49773.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO49773.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AWUE01024780; OMO49773.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3FV96; -.
DR STRING; 93759.A0A1R3FV96; -.
DR OrthoDB; 952146at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR026960; RVT-Znf.
DR InterPro; IPR000679; Znf_GATA.
DR PANTHER; PTHR46736:SF90; OS05G0232300 PROTEIN; 1.
DR PANTHER; PTHR46736; ZF-RVT DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13456; RVT_3; 1.
DR Pfam; PF13966; zf-RVT; 1.
DR PROSITE; PS50114; GATA_ZN_FINGER_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00094};
KW Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00094};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00094}.
FT DOMAIN 136..163
FT /note="GATA-type"
FT /evidence="ECO:0000259|PROSITE:PS50114"
SQ SEQUENCE 427 AA; 48600 MW; 109271DFA354AF9C CRC64;
MKEEDKAAIV NALGLNGRVL GDLGKTDEDI PQLVHEIMVK DEGIWNLEGI EQWISEEEQE
AILSIPVHEG EEQDKRIWAI DKSRVYSVKF GYASLKVAMQ NNMCSRASSS HQIDKRLWKV
IWSIKAASKV KVFLWRMCRH ALATNEELWK RKCKDEPICV LCGEDVESVE HLILLCPWTR
QVWWQGCFGL KICKERVRTI DQWLLEVFME VSKLSKEAES LKTTIAYTCW VIWNSRCRAV
MEHKEVSGDK VIQWIQSAVS EFLSVWNQNS HQVSKALKPT SKASIGIIIR DHFGKLIEGD
GKKVIGDSVL ISEALAVKEG MKLANILHME QVEVEMDCEC SFRSIMNPTV GADWKIRPIV
ADIVSLKNCF NVVEFKCVKR DANMAADWVA IQSRLGMGFA ELSRYQPSSL VRILEKDGLP
TPHSSVL
//
