ID A0A1R3GBW0_COCAP Unreviewed; 380 AA.
AC A0A1R3GBW0;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Double-stranded RNA-binding protein {ECO:0000313|EMBL:OMO55546.1};
GN ORFNames=CCACVL1_27202 {ECO:0000313|EMBL:OMO55546.1};
OS Corchorus capsularis (Jute).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO55546.1, ECO:0000313|Proteomes:UP000188268};
RN [1] {ECO:0000313|EMBL:OMO55546.1, ECO:0000313|Proteomes:UP000188268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC TISSUE=Whole seedling {ECO:0000313|EMBL:OMO55546.1};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT "Corchorus capsularis genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO55546.1}.
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DR EMBL; AWWV01014650; OMO55546.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3GBW0; -.
DR STRING; 210143.A0A1R3GBW0; -.
DR EnsemblPlants; OMO55546; OMO55546; CCACVL1_27202.
DR Gramene; OMO55546; OMO55546; CCACVL1_27202.
DR OMA; AKPPHHE; -.
DR OrthoDB; 1222075at2759; -.
DR Proteomes; UP000188268; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd00048; DSRM_SF; 1.
DR Gene3D; 3.30.160.20; -; 2.
DR InterPro; IPR014720; dsRBD_dom.
DR PANTHER; PTHR46031:SF37; (WILD MALAYSIAN BANANA) HYPOTHETICAL PROTEIN; 1.
DR PANTHER; PTHR46031; DOUBLE-STRANDED RNA-BINDING PROTEIN 6; 1.
DR Pfam; PF00035; dsrm; 2.
DR SMART; SM00358; DSRM; 2.
DR SUPFAM; SSF54768; dsRNA-binding domain-like; 2.
DR PROSITE; PS50137; DS_RBD; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000188268};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00266}.
FT DOMAIN 38..107
FT /note="DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50137"
FT DOMAIN 123..190
FT /note="DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50137"
FT REGION 13..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 325..352
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 380 AA; 42214 MW; 042590A33A4FE074 CRC64;
MENPIPASLQ IEACNQPSAP NPSTSNNPST SRTQEPLMHK NRLNTYAQRL SMEHPVYQTV
NEGPPHVPRF RSTVVVDGIS YTSVNTFSHR KTAEQDAAKL ALESIAKKIK DEGWPLIRED
TVFCKSILHE YAVKMNLEMP TYSTIQPEVS VPYFVSSLVF NGVTYNGNCG RNKKEAEQLA
ARAVLRSLLD DPRYGTFLSE IIKSKTKMFN AVNKVKDLSF SRPASVPTEA NMLIHKNTEV
ETAAVTDSTS TGAILQPSSE AKPPHHELIH ETKEVETAVV PDRVPTTAIL QPMSAKPPHH
EFRIRKLEQE TECVNLPITF VPSAFGQSSD VGQSSSSKRR KKKKRAKLHN DTQLAVASIP
LNQVESSQWP AVNFKQEASC
//
