ID A0A1R3GGM8_COCAP Unreviewed; 723 AA.
AC A0A1R3GGM8;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Glucose-inhibited division protein A-related protein {ECO:0000313|EMBL:OMO57219.1};
GN ORFNames=CCACVL1_25901 {ECO:0000313|EMBL:OMO57219.1};
OS Corchorus capsularis (Jute).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO57219.1, ECO:0000313|Proteomes:UP000188268};
RN [1] {ECO:0000313|EMBL:OMO57219.1, ECO:0000313|Proteomes:UP000188268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC TISSUE=Whole seedling {ECO:0000313|EMBL:OMO57219.1};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT "Corchorus capsularis genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in the 5-carboxymethylaminomethyl modification
CC (mnm(5)s(2)U34) of the wobble uridine base in mitochondrial tRNAs.
CC {ECO:0000256|ARBA:ARBA00002739}.
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000256|ARBA:ARBA00001974};
CC -!- SIMILARITY: Belongs to the MnmG family.
CC {ECO:0000256|ARBA:ARBA00007653}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO57219.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AWWV01014405; OMO57219.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3GGM8; -.
DR STRING; 210143.A0A1R3GGM8; -.
DR EnsemblPlants; OMO57219; OMO57219; CCACVL1_25901.
DR Gramene; OMO57219; OMO57219; CCACVL1_25901.
DR OMA; CNPAMGG; -.
DR OrthoDB; 5486689at2759; -.
DR Proteomes; UP000188268; Unassembled WGS sequence.
DR GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
DR GO; GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 2.
DR Gene3D; 1.10.150.570; GidA associated domain, C-terminal subdomain; 1.
DR Gene3D; 1.10.10.1800; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA; 1.
DR HAMAP; MF_00129; MnmG_GidA; 1.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR049312; GIDA_C_N.
DR InterPro; IPR004416; MnmG.
DR InterPro; IPR002218; MnmG-rel.
DR InterPro; IPR020595; MnmG-rel_CS.
DR InterPro; IPR026904; MnmG_C.
DR InterPro; IPR047001; MnmG_C_subdom.
DR InterPro; IPR044920; MnmG_C_subdom_sf.
DR InterPro; IPR040131; MnmG_N.
DR NCBIfam; TIGR00136; gidA; 1.
DR PANTHER; PTHR11806; GLUCOSE INHIBITED DIVISION PROTEIN A; 1.
DR PANTHER; PTHR11806:SF0; PROTEIN MTO1 HOMOLOG, MITOCHONDRIAL; 1.
DR Pfam; PF01134; GIDA; 1.
DR Pfam; PF13932; GIDA_C; 1.
DR Pfam; PF21680; GIDA_C_1st; 1.
DR PRINTS; PR00411; PNDRDTASEI.
DR SMART; SM01228; GIDA_assoc_3; 1.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
DR PROSITE; PS01280; GIDA_1; 1.
PE 3: Inferred from homology;
KW FAD {ECO:0000256|ARBA:ARBA00022827};
KW Flavoprotein {ECO:0000256|ARBA:ARBA00022630};
KW Reference proteome {ECO:0000313|Proteomes:UP000188268}.
FT DOMAIN 613..684
FT /note="tRNA uridine 5-carboxymethylaminomethyl modification
FT enzyme C-terminal subdomain"
FT /evidence="ECO:0000259|SMART:SM01228"
SQ SEQUENCE 723 AA; 81203 MW; AB915043CE776BF8 CRC64;
MSMLSVHLSR LTRQHFPFPS SLFSPSSRPR HHAFVSYRRS LRFSTPKKFS FRCFCSFSPT
NSNGNGHVGA GEERYDVIVV GGGHAGCEAA LASARLGAKT LLLTLNIDRI AWQPCNPAVG
GLAKSQLVHE VDALGGEIGK IADRCYLQKR VLNASRGPAV RALRAQTDKR EYAMQMKKVV
ESTPNLSIRE AMVTDILLGK NDNVEGVCTF FGMNFYAPAV ILTTGTFMSG KIWVGRTSMP
AGRAGESASH GLTENLQRLG FESDRLKTGT PARVDCRTVD FSVLEPQHGD EEVSWFSFDP
DFHIEREQMC CYLTRTTKST HKLIEDNLHE TPTYGGWVEA KGPRYCPSIE DKIVRFKDKE
SHQIFLEPEG RTVPELYVQG FSTGLPERLQ LPLLRTLPGL ENCSMLRPAY AVEYDYLPAH
QCSRSLMTKK IEGLFFSGQI NGTTGYEEAA AQGIISGINA ARYSDGKPLI VLERESSYIG
TLIDDLVTKD LREPYRMLTS RSEHRLLLRS DNADSRLTPL GREIGLIDDR RWKIYQEKQA
KISEEKKRLK TVKISGGDLA AEVSQLSGQP VKDNSTLETL LKKPHIEYKV FDKHGFGNKM
LSRIEKECVE IDIKYEGFII REKQHLQQMV NQQNRRLPED LDYYAMTTLS LEAREKLSKV
RPQTIGQARR VGGVSPADIT ALMIILETNR RRAQEQRRHQ MLASVMADTV ENTSDTLTEA
VSN
//
