ID A0A1R3GN11_COCAP Unreviewed; 784 AA.
AC A0A1R3GN11;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=isoleucine--tRNA ligase {ECO:0000256|ARBA:ARBA00013165};
DE EC=6.1.1.5 {ECO:0000256|ARBA:ARBA00013165};
DE AltName: Full=Isoleucyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00032665};
GN ORFNames=CCACVL1_24822 {ECO:0000313|EMBL:OMO59452.1};
OS Corchorus capsularis (Jute).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO59452.1, ECO:0000313|Proteomes:UP000188268};
RN [1] {ECO:0000313|EMBL:OMO59452.1, ECO:0000313|Proteomes:UP000188268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC TISSUE=Whole seedling {ECO:0000313|EMBL:OMO59452.1};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT "Corchorus capsularis genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO59452.1}.
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DR EMBL; AWWV01013941; OMO59452.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3GN11; -.
DR STRING; 210143.A0A1R3GN11; -.
DR EnsemblPlants; OMO59452; OMO59452; CCACVL1_24822.
DR Gramene; OMO59452; OMO59452; CCACVL1_24822.
DR OMA; WPAANEN; -.
DR OrthoDB; 656at2759; -.
DR Proteomes; UP000188268; Unassembled WGS sequence.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004822; F:isoleucine-tRNA ligase activity; IEA:UniProtKB-EC.
DR GO; GO:0000049; F:tRNA binding; IEA:InterPro.
DR GO; GO:0006428; P:isoleucyl-tRNA aminoacylation; IEA:InterPro.
DR CDD; cd07960; Anticodon_Ia_Ile_BEm; 1.
DR CDD; cd00818; IleRS_core; 1.
DR Gene3D; 1.10.730.20; -; 1.
DR Gene3D; 3.40.50.620; HUPs; 1.
DR Gene3D; 3.90.740.10; Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain; 1.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033708; Anticodon_Ile_BEm.
DR InterPro; IPR002301; Ile-tRNA-ligase.
DR InterPro; IPR025709; Leu_tRNA-synth_edit.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR010663; Znf_FPG/IleRS.
DR PANTHER; PTHR42765:SF1; ISOLEUCINE--TRNA LIGASE, MITOCHONDRIAL; 1.
DR PANTHER; PTHR42765; SOLEUCYL-TRNA SYNTHETASE; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR Pfam; PF13603; tRNA-synt_1_2; 1.
DR Pfam; PF06827; zf-FPG_IleRS; 1.
DR PRINTS; PR00984; TRNASYNTHILE.
DR SUPFAM; SSF47323; Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases; 1.
DR SUPFAM; SSF52374; Nucleotidylyl transferase; 1.
DR SUPFAM; SSF50677; ValRS/IleRS/LeuRS editing domain; 1.
PE 4: Predicted;
KW Aminoacyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00023146,
KW ECO:0000313|EMBL:OMO59452.1}; ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Ligase {ECO:0000256|ARBA:ARBA00022598};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000188268}.
FT DOMAIN 118..175
FT /note="Leucyl-tRNA synthetase editing"
FT /evidence="ECO:0000259|Pfam:PF13603"
FT DOMAIN 219..464
FT /note="Aminoacyl-tRNA synthetase class Ia"
FT /evidence="ECO:0000259|Pfam:PF00133"
FT DOMAIN 509..672
FT /note="Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase
FT anticodon-binding"
FT /evidence="ECO:0000259|Pfam:PF08264"
FT DOMAIN 742..770
FT /note="Zinc finger FPG/IleRS-type"
FT /evidence="ECO:0000259|Pfam:PF06827"
SQ SEQUENCE 784 AA; 88287 MW; A388FA3BC4BA0195 CRC64;
MSAVCTLKAS ETLSVDNYCT LVTEIVLKTC HPIEDLTRDR LLAVAVNAKL QYAVVEVKSF
SEDVLMSAGN KKKRLGAVMN EPKKPFFIVA YDLVPTIETK WGVKLIVKKT LFGSDLENCR
YVHPINNREC PVVIGGDYIT TESGTGLVHT APGHGQEDYM TGLKYGLPIY SPVDDDGKFT
EEAGQFSGLD VLGDGNIAVV KYLDEKMSIV MEESYEHKYP YDWRTKKPTI FRATEQWFAS
VEGFRQAALE AIGNVKWIPA QAENRISAMT SSRSDWCISR QRTWGLPIPV FYHVSSKEPL
MNKETIDHIK SIIAQKGSDA WWYMRVEDLL PDKYRSKASE YEKGTDTMDV WFDSGSSWAA
VLGKRDGLSF PADLYLEGTD QHRGWFQSSL LTSIATKGKA PYSSVVTHGF VLDEKGSKMS
KSLGNVVDPR NVIAGGQNQK EAPAYGADIL RLWVSSVDYT GDVMIGPQIL RQMSDIYRKL
RGTLRYLLGN LHDWKVENAV SYHELPMIDQ HALFQLENVV RNIREGYESY QFFKIFQIIQ
RFVIVDLSNF YFDVAKDRLY VGGTASFTRR SCQTVLAAHL LSLARVISPI LPHLAEDVWQ
NLPFKYTMED GSIAEFVFEA KWPASNEKWL TFPVEEIDFW GKILELRTEV NKVLEVARTG
KLIGSSLEAK VFLHASDATL ASRLLEMCSA SNDADTLHRI FLTSQVEVVP SLGNEVVQNI
QYTGEYLVQE DRVWIGVSRA EGSKCERCWN YSHQVGSFME HPTLCGRCFN VVGTQATPVM
AAVN
//
