ID A0A1R3GRJ5_COCAP Unreviewed; 911 AA.
AC A0A1R3GRJ5;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=DNA 3'-5' helicase {ECO:0000256|ARBA:ARBA00034808};
DE EC=5.6.2.4 {ECO:0000256|ARBA:ARBA00034808};
GN ORFNames=CCACVL1_23911 {ECO:0000313|EMBL:OMO60735.1};
OS Corchorus capsularis (Jute).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO60735.1, ECO:0000313|Proteomes:UP000188268};
RN [1] {ECO:0000313|EMBL:OMO60735.1, ECO:0000313|Proteomes:UP000188268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC TISSUE=Whole seedling {ECO:0000313|EMBL:OMO60735.1};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT "Corchorus capsularis genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=5.6.2.4;
CC Evidence={ECO:0000256|ARBA:ARBA00034618};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO60735.1}.
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DR EMBL; AWWV01013652; OMO60735.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3GRJ5; -.
DR STRING; 210143.A0A1R3GRJ5; -.
DR EnsemblPlants; OMO60735; OMO60735; CCACVL1_23911.
DR Gramene; OMO60735; OMO60735; CCACVL1_23911.
DR OrthoDB; 2909243at2759; -.
DR Proteomes; UP000188268; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR014017; DNA_helicase_UvrD-like_C.
DR InterPro; IPR045529; DUF6469.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR039904; TRANK1.
DR InterPro; IPR014016; UvrD-like_ATP-bd.
DR PANTHER; PTHR21529; MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2; 1.
DR PANTHER; PTHR21529:SF4; TPR AND ANKYRIN REPEAT-CONTAINING PROTEIN 1; 1.
DR Pfam; PF20073; DUF6469; 1.
DR Pfam; PF00580; UvrD-helicase; 1.
DR Pfam; PF13361; UvrD_C; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000188268}.
FT DOMAIN 171..295
FT /note="DUF6469"
FT /evidence="ECO:0000259|Pfam:PF20073"
FT DOMAIN 457..544
FT /note="UvrD-like helicase ATP-binding"
FT /evidence="ECO:0000259|Pfam:PF00580"
FT DOMAIN 681..769
FT /note="UvrD-like helicase C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13361"
FT REGION 1..99
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..28
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 29..45
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 911 AA; 105002 MW; 2FE6F82D6D3CCBBD CRC64;
MGGNGSSEKR VITENNLGSF GSSEVKMEAQ SSSEEEVVAR NIREVKRRNL RSKKKKSDES
EGKMGAQSSI ENREITREKM GSYSSDALEK KMGGDCSSER RDFPTNLEFV PTVLSWSVED
IFNDNLYKDQ VEKIPDSFES TEQYFGSYLL PLLEETRAEM RSSMEIIDTA PYAEVTYFKE
AKLRGTSLYN VNVDSWRNRF SDLGREPYKT LTGDVFLIVD AKPETASDLQ GAGRTWTFAL
VTNISEDAAS DSFEVKAPKN IASRDEKQKT LFVVYLMNLS SNRRIWDALH LKGNLTIVKQ
VLHNVVILPQ FACGGNYIRE SALEDVAAQF KDIPDSFVDI LPKEYPLVIT LQKFLIMLDK
TIGYSFFDKF LDARKVENAP VVLRNLIRTR EVNYEKFCLT YWPQFKAKLT KKLDSSRVFT
EIMSHIKGGL RSGDSCYGIL SEEDYISLSE CWISTLSRQE RQMVYNIFQD YEKMKERNRE
FDMADLVIDL HCRFQNEKYE GDMMDFVYID EVQDLTMRQI ALFKYVCKNV NEGFVFCGDT
AQTIARGVDF RFEDIRCLFY NEFILESKCK TNDGKREKGQ ISKTFHLSQN FRTHDGVLRL
AQSIIDLLYR FFPLFVDMLS PETSLIYGQA PIWLEPEKED NAIATIFKFL GNEPGAMVGF
GAEQVILVRD DPSKNEILKH VGKKALVLTI MECKGLEFQD VFLYNFFGSS PLKSQWRVIY
EYMMEKGLLD ASWSCTSFSQ EKHNILCSEL KQLYVAITRT RQRLWICENE EELSNQVVDY
WKKQRLVQVR KMDDSLAQAM QVASSPEEWK SRGYKLLWQG NYMMATICFE RAHHTYGEKL
AKAFGLRQDA DLLHGSDPER ASLARRQAAE IFSSIGKAED AADCFYMLHE YEKAGKIPLR
ILVIISNMIL R
//
