ID A0A1R3GSR5_9ROSI Unreviewed; 919 AA.
AC A0A1R3GSR5;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=Zinc finger, CCHC-type {ECO:0008006|Google:ProtNLM};
GN ORFNames=COLO4_33544 {ECO:0000313|EMBL:OMO61133.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMO61133.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO61133.1}.
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DR EMBL; AWUE01021754; OMO61133.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3GSR5; -.
DR OrthoDB; 641058at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.20.1280.50; -; 1.
DR InterPro; IPR025558; DUF4283.
DR InterPro; IPR013187; F-box-assoc_dom_typ3.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR025836; Zn_knuckle_CX2CX4HX4C.
DR InterPro; IPR001878; Znf_CCHC.
DR PANTHER; PTHR31790:SF587; F-BOX DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR31790; OS02G0783600 PROTEIN; 1.
DR Pfam; PF14111; DUF4283; 1.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08268; FBA_3; 1.
DR Pfam; PF14392; zf-CCHC_4; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; F-box domain; 1.
DR PROSITE; PS50181; FBOX; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 1..48
FT /note="F-box"
FT /evidence="ECO:0000259|PROSITE:PS50181"
FT DOMAIN 519..534
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 566..592
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 641..705
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 870..898
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 881..897
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 919 AA; 105215 MW; 093122D90D50FD3E CRC64;
MSDYFNLPKE LFVEILLRLR IQDLGKFTVV CKSWNSFIKT PTFISTRLNR TISSTNTNLL
FFRLYTSKPR RWPESPRLCL RYSLRFDNKA LDEYKKLPCP KIGKCRRFRV AGSINGLVCL
VYDIGPYDYT SDELREKGYV YEFSEKGLRQ RQKDFNALTF ILWNSVIKKA IHLPEPARYG
SCILLNLKLK FTLSMLIFWR SITSIAPNYS PLIDPPNNHG NSFVNHGNSF VILAFDVSDE
VFSEIPLPDN LSYVPDVGRA QLLKYGESSI AIVNWDWEHG RGLIHLWVMK EYGVATSWTK
MLTTENQRVS RVLFFRQDEE AFVTRSSGWI ASLGIKSNHL ENLGESEGNR QRESMEEDLI
VDLEVEGDSG REDTRFGLIG KIISDRVLNR RGVMNVMQSI WPAKALLKTV MGHCLCLRRW
DLSLAVREIK FEEVSFWAQV HNLPLELMTC NNARRIGISL GRVIEVEDPN WLRGFGRSFL
RIKIVVNVSK PLIGKFKTSR GSGDFITAEV KYEKLGDFCY QCGMLGHSEK NCERSGGNIT
REIGKGKYGP WMRGLSIRSF GRKEEVSSGR DAPDLVVGNL EPSNNHRGVE TDDLKENNSI
VVNREERVME RGEGSGSQQT TVEDHIERGV AEWPCSYYIE EDDPSSNQIP NQTVPKTPTK
KLFSSPLVSQ SSPIKSPPKN SIYEVFSPSN TQQTPKKRSL TPPISDNLQC PILNDDFTIT
SPLKKHQTLR DITNSLNKSS PIHDQTLTPQ HRHFSRAINL FPHPPNNHIP PNNPILSNPP
MEYTVELPPE DDNTKEVVCH EMISQQLVPI LRNLSLKRSH SSILEEGHSN YRQKARQVEL
YEIAQKIFNV DEEEDCRVEE VQRSICIESS SNDQKERVTT KKMQKQRRVV RRKGKSRGGR
LTVLEQESLW EAPVSVSED
//
