ID A0A1R3H355_9ROSI Unreviewed; 966 AA.
AC A0A1R3H355;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=Zinc finger, RING-type {ECO:0008006|Google:ProtNLM};
GN ORFNames=COLO4_31820 {ECO:0000313|EMBL:OMO64782.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMO64782.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO64782.1}.
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DR EMBL; AWUE01020876; OMO64782.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3H355; -.
DR STRING; 93759.A0A1R3H355; -.
DR OrthoDB; 3473445at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0032454; F:histone H3K9 demethylase activity; IEA:InterPro.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR045109; JHDM2-like.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR001841; Znf_RING.
DR PANTHER; PTHR12549; JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN; 1.
DR PANTHER; PTHR12549:SF73; JMJC DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02373; JmjC; 1.
DR SMART; SM00558; JmjC; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 247..293
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 666..927
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 34..89
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 106..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 141..163
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 177..227
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 786..808
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..54
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 65..89
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 200..227
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 966 AA; 110377 MW; E6A3AA96CD1BD300 CRC64;
MAAVIAKREQ FNCGQSMQIS SWHVKKKRNH IMQHRDIKNA LSEGKDDDRQ LAKRAKKSSK
KRKRSTENKS SEDEKSPKRH WNGRDNVTTS EDEIDEEIIA LINMKQRRRS RNSDNVVTTR
SPKEDKSDNE VIASFINKRV RRRSRNSESV VTTRSSKEDD SDNEVIASLI KMKERRQSRN
CDSVVTTRSP KESKEKNCNP IDTSLRSSSS LSASSSSSSL AHLKSDGSSN DICTNKNVKA
KRENIKCHQC MAQRRIVVPC MNCKDKVYCL SCIRRWYPNI PEEEIAEQCP FCRTNCNCTI
CLHSSGLIKT SERDITHQEK IKHLEYFLES TLPFLKQISQ IQKKETEVEA NIQGLLPSAV
DITETLCYND ERVYCNHCAT SIFDLHRSCP KCSYELCLSC CQEIREGRLT SRDGVAYKYR
DRGYDYIHGG DPLPESDLHE MAKDQAEPSV EWKANNDGSI TCPSKEMGGC GDCILQLKRI
LPVGWISNLA AKAGEMLRSK TRQGRLKHEC AVPGTETLKR VASREGSNDN CLYSPSSSDI
QEGDLCNFQM HWAKGEPVIV QNALANSTGL SWEPMVMWRA LSEKVDSDRS LQASEVKAID
CLAGCEVNIN THQFFKGYVE GRTYHNFWPE MLKLKDWPPS NKFEDLLPRH CDEFIRALPF
QEYCDPRSGI LNLAVKLPPN LLKPDLGPKT YIAYGIAEEL GRGDSVTKLH CDLSDAVNIL
THTADVAITE EQLAAIEKLK MKHKAQDEKE DLEREGVDKH PDQVLAAERT DLENKTYVLE
ITDQKDHHSD NISKDEHGSQ IPGLSTAEKE RGGALWDIFR REDVPNLEAY LRKHFKEFRH
TYCAPVEQVI HPIHDQTFYL TVEHKRKLKE EYGVEPWTFE QNLGEAVFIP AGCPHQVRNL
KSCTKVAMDF VSPENIKECL RLTEEFRQLP KNHRAREDKL EIKKMIIYGV DRVIKELEEL
IISIPD
//
