ID A0A1R3H3W1_9ROSI Unreviewed; 632 AA.
AC A0A1R3H3W1;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 08-NOV-2023, entry version 18.
DE RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=COLO4_31627 {ECO:0000313|EMBL:OMO65023.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMO65023.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU01002}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO65023.1}.
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DR EMBL; AWUE01020863; OMO65023.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3H3W1; -.
DR STRING; 93759.A0A1R3H3W1; -.
DR OrthoDB; 3473445at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0032454; F:histone H3K9 demethylase activity; IEA:InterPro.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR045109; JHDM2-like.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR014977; WRC_dom.
DR PANTHER; PTHR12549; JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN; 1.
DR PANTHER; PTHR12549:SF42; PROTEIN B160; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF08879; WRC; 1.
DR SMART; SM00558; JmjC; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51667; WRC; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000187203}.
FT DOMAIN 9..53
FT /note="WRC"
FT /evidence="ECO:0000259|PROSITE:PS51667"
FT DOMAIN 281..592
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 355..447
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 360..375
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 402..416
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 632 AA; 72470 MW; CBE96F5C24288813 CRC64;
MEEEEGGALP DHLRCKRTDG RQWRCKRRVM EDKKLCEIHH IQGRHRQRKQ KVPESLKMQR
KNWKRNAFEK NKLEIRAKLL KLAKPMKRKR LIGGESEALD EAAKSSVIFR SNQLRLVAIS
NIADYEAKGV KQLQEAARRD NSNDNFLFYP SVMNIHGDSL EHFQKHWGKG HPVIVRNVLQ
DTSDLSWDPI FLFCSYLKNS LTKSENEEEL TKATGCSDWF EVEIGIKQLL LGSLRGPAQS
NMCDEKLKLK GWLSSHLFQE QFPDHFAEII RALPFPEYMD PRSGLLNIAA RLPQEIAKPE
LGPCVSFSYF SGEELVQVNS VTKLRYNSCD VVNILAHATD APVSMKQLNR IRKLMKKKKS
HDQREFAKTY ADQKMANEVK EQYPPCKNMG EVGMNDMGEH DNLPKVSQSP SAVHEAQGLG
FNNGEADHGK EDSSDTDSDS DCNSNSEPAL LLSHTIHSSE GLENHEVFGK RTKLAKSCGA
EWDVFRRQDV PKLMEYLRKH SNEFGHICGF LKQVVHPILD QNFFLDTGHK IRLKEEYEVE
PWTFEQHVGE AVIIPAGCPY QIRNVKSCVN VVLDFVSPEN VTECIQLIDE LRLLPEDHKA
KAEKFEMQQV KKMALYRTSS AIKEIRELTY AE
//
