ID A0A1R3H3W3_9ROSI Unreviewed; 1041 AA.
AC A0A1R3H3W3;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE SubName: Full=Stromal antigen {ECO:0000313|EMBL:OMO64970.1};
GN ORFNames=COLO4_31667 {ECO:0000313|EMBL:OMO64970.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMO64970.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO64970.1}.
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DR EMBL; AWUE01020865; OMO64970.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3H3W3; -.
DR STRING; 93759.A0A1R3H3W3; -.
DR OrthoDB; 5354237at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:UniProt.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0007062; P:sister chromatid cohesion; IEA:UniProt.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR039662; Cohesin_Scc3/SA.
DR InterPro; IPR020839; SCD.
DR InterPro; IPR013721; STAG.
DR PANTHER; PTHR11199:SF0; LD34181P-RELATED; 1.
DR PANTHER; PTHR11199; STROMAL ANTIGEN; 1.
DR Pfam; PF21581; SCD; 1.
DR Pfam; PF08514; STAG; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR PROSITE; PS51425; SCD; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000187203}.
FT DOMAIN 300..386
FT /note="SCD"
FT /evidence="ECO:0000259|PROSITE:PS51425"
FT REGION 1..70
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 56..70
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1041 AA; 119409 MW; 7704AD7138926276 CRC64;
MTKSKRLRAM DGDNAPSPSL LPTRRSKRIR DRSEATTGNN GSPTMTEPMV PKPKRTPPSD
QTNQSSGSPI MAEPMVFKAK RTPPSDQTNQ SLSLIEVIEG DGKHITETVR RWVDWYEKEP
KPAMSQLLSM LIQACGAKCE IKEEFFDEAN VEDVVVALVD LARNGEVEEH HSFKSKEFKK
FKGNLVSFWD NLVIECQYGP LFDNVLFDKC LDYVIALSST PARQYRQVAV PIGLQLVTSF
ITVAKTLSKQ GQTSQRQSNA KKAKKEKGPV VEQLVDKTSR TQERVNMTKQ MMEKLYTRLF
RHRYRDIDPN IRMMCIESLG TWICSHPVYF LQDEYLKYFG WMLNDKIAGV RKASVLALQN
LYDQVANSAQ LTKTFCKKFS NRIIELVDDI DVNVAVSSIG LIRQLLRHEL LDGDNLQPLY
DDLVIDDKPE IRHAIGELLY DHLIAENMNS LIQSGAKGND SQDHLDKMLE ILRKFSTNST
ISLYFIDAVW DYMKAMKDWK CIFLILLDQD LAEEDATNLV RLLSALLRKA VGEKVIPIDD
RKQCHKNKAQ KETFEKNRQN ITIAMMMKGY DYPSLLSKFL ADKKKVPLLL EIIIHMNLEL
YSLKKQEEVG FQKGCVQCIN EAFFKHFEEE ALRSCVKAIE FCCSKSPGEL RDFFCNKLKD
LEDELITKLK CGFKEVMDDG DEYNLLVNLK RLYELQLSRP LQNESLYEDI ITFLHSYRDL
NDEVTSFLLL NVYLHIAWSL KAIINSKTVS QSSVSSLLSK RDTLFEELEY FLNNYPKVGE
DNKSANVLAC RVCTILADLW CIFRKREFSS TMLENLGFSP STLILQKFWG LCEQLFSISE
DQDVDREYIE ETSREVVMIA AAKLIVTDIV PKEFLAPKVI SHFVMHGTSM TEIVKNLIKV
LKKNDNDVSS IFLEALKRTH QCFMELSTSD DESLRCKSFQ DCKDLAAELS GTFEGANQEK
DRSDILKIVK GGITYAFEDA PKQLSFLEAA VSCFIPELPI SDVQDIQKDL EKRMENHQTV
EDPSRWQHYH AFYNALKAIK K
//