ID A0A1R3H835_COCAP Unreviewed; 1420 AA.
AC A0A1R3H835;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Zinc finger, PHD-type {ECO:0000313|EMBL:OMO66519.1};
GN ORFNames=CCACVL1_21100 {ECO:0000313|EMBL:OMO66519.1};
OS Corchorus capsularis (Jute).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO66519.1, ECO:0000313|Proteomes:UP000188268};
RN [1] {ECO:0000313|EMBL:OMO66519.1, ECO:0000313|Proteomes:UP000188268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC TISSUE=Whole seedling {ECO:0000313|EMBL:OMO66519.1};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT "Corchorus capsularis genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO66519.1}.
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DR EMBL; AWWV01012523; OMO66519.1; -; Genomic_DNA.
DR STRING; 210143.A0A1R3H835; -.
DR EnsemblPlants; OMO66519; OMO66519; CCACVL1_21100.
DR Gramene; OMO66519; OMO66519; CCACVL1_21100.
DR OrthoDB; 801328at2759; -.
DR Proteomes; UP000188268; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR046349; C1-like_sf.
DR InterPro; IPR004146; DC1.
DR InterPro; IPR002219; PE/DAG-bd.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR32410:SF207; C1 DOMAIN FAMILY PROTEIN, PUTATIVE-RELATED; 1.
DR PANTHER; PTHR32410; CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN; 1.
DR Pfam; PF03107; C1_2; 7.
DR SMART; SM00249; PHD; 6.
DR SUPFAM; SSF57889; Cysteine-rich domain; 9.
DR PROSITE; PS50081; ZF_DAG_PE_2; 2.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000188268};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 536..592
FT /note="Phorbol-ester/DAG-type"
FT /evidence="ECO:0000259|PROSITE:PS50081"
FT DOMAIN 1361..1409
FT /note="Phorbol-ester/DAG-type"
FT /evidence="ECO:0000259|PROSITE:PS50081"
SQ SEQUENCE 1420 AA; 163243 MW; 186B5A1715221F7F CRC64;
MKQGLLLWSP CYLSPPISHS ISLQIPTTKH APKLPSISAS IDSAEQSKKA KKRYASEELN
LDNLAHLDPQ WWVVRGLRQP SSWARTLARN FPDIDEFRRN YYRKDLVADL LFNVKMNGGK
EEMDGTLRYL GHEHPLAAVV QDGQITTASD QYCRCYCCGE AIINGTPSYC CSLKECKFFL
HKSCAELELP PRIDHALHPQ HPLDLVVPEI PGGYHWCDFC GSHNRLLISY YCASCSFRLD
VRCALLISLA EIFLKSVHDH PLVLLESQNF GFTVTFFQFL DYGFCITCKK SISSLPIYKC
FHCEDKFSLH KECAELPRQI NHPYDRLHRL SLFPSPVSHQ EECSCYSCKI IKWDGLVYRC
SPCNIELTLE DVSAPQTISV SDTSYHEHPW TLVPCPMSFT CDFCGLEGDR TPYICTTCNL
VVHRKCTKMP RAIRIARHRH PISHVYSLQQ SDDDRLYEEC RICYERVMAR YGSYFCSAPN
CNYIAHVHCA TDPNIWDGTI VLEDDEMTCN EFDLNMITDV ISEVSVGEDE MAMEIKHAFH
PHNLMLSFKD QIMDDNICHG CMRLISSTHF YNCKKCSFFL HKSCAELPRV YGHPIHKHLL
KLEKSEETFL CTACDRLHDG FMYTCDHEDC RYLRGRLCFK LDIQCSLLPD SLRHPSHEHR
LFLSLDDHRG DCRGCPEKGI SPAYRCTKRC DFAVDVRCLT LPETAKYKYD RHPLTLAYYD
KSDPKQIYCD VWEEERDSSN WFYHCARCDN SLHQECALGQ LPFIQIGSTC KLYRHKHGHF
TFVENIWDCP PCNSCREICY RQSDTQQQQL SARERRQLRN ERRQIDSLGS SMVGCSGLQG
SWSRDKPRSW LEHSVGTSQK SNLRGVVDID ESSCVLGEEE AVCKGHLEIT RMPLQVEADM
ALDDGYTPLL HLAAMNGKAS DEEHITKSSL LLGLIRVALV DLKDLVADLL FNFNMDGGKG
EMDGTLQYFG HEHPLVFVQD PQITASDQHC GCCGESTEGT PSYCCSLKDL KAFYRCFHCD
DIFSLHKECA ELPLQINHPY DTSSFTLPKS NFPSRGICLD TTNNFNFRHN SPTSMDSGAM
SNVIHQQQSG DDDDRLYEEC RICYEKVMLR YGIYFCSAPN CNYIAHVHCA TDRNIWDGTV
VLEGDEMSSN EFDQNMITDV ISEVKVGEDV MAMEIKHAFH DHDLILNFKG EIMDDTICNG
CIRPISTTDH FYTCKKCSFF LHKSCAELPR VIGHPIHKHL LKLEKSKEIF FCRACARLYN
GFVYTCDNED CSRIYWDGFK LDIQCSLLPD SLRHPSHEQH RLFLSLDDYK GDCRGCPNKG
ITTAYRCTKP CDFAVDVRCL TLPQTIGSKC MEEYEPGQHH EHNFTFVDNI WDCPPCEECG
KICYRQALKC EECNYTIHWI CPRENDLRLA SLGWKIYYRM
//
