ID A0A1R3HE09_9ROSI Unreviewed; 583 AA.
AC A0A1R3HE09;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=COLO4_29578 {ECO:0000313|EMBL:OMO68572.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMO68572.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO68572.1}.
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DR EMBL; AWUE01020375; OMO68572.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3HE09; -.
DR STRING; 93759.A0A1R3HE09; -.
DR OrthoDB; 468363at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR PANTHER; PTHR24015:SF2035; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 3.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 42..76
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 276..310
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 311..345
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 491..583
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 583 AA; 65664 MW; 815B5305665565F6 CRC64;
MCKCNTQVSY LHALLQLCAR NRAAIQGQAC HAQTFHFGLH QDTITSNILI NMYCKSGVMS
SARKVFDQMP ERSLVSWNSL IGSHAQNGEA QQALTLFRSM QREGSLFSEF TISSLLCACA
AKCAVFECKQ LHGFAIKAAV DSNMFVGTAL VDVYAKCALV KDACLVFDNM KERNVVTWSC
MAVGYVQNEL FEDALLLFRR AQIMEVEHDQ FMFSSIVSAC AGLAALIEGK QVHAIISKTG
FGSNNVFVTS SLIDMYAKCG SVEEAYAVFT GIKEKNIVSW NTMISGFAKH ARALEAMILF
EKMQQIGLHP NQFTYSSVLS ACSHMGLVDE AKSYFDLMRK EHNVPPNEIH YSCMVDVLGR
VGKVSEAYHL IKRMPFDATA SMWGSLLACC RFHGNLELAK VAAKHLFELE PDNAGNHILL
SNIYAANKKW EEVARTRTLL KESMVKKERG KSWIAIKDKV HAFMVGEINH PRIAEIYSKL
DNLVEEMKIL GYRVETEHDF HDVEDSRKQQ LLKHHSEKLA LTFGLLCLPS NAPIRIMKNL
RICGDCHSFM KLASRVTQRE IIVRDINRFH HFRNGFCSCA DFW
//
