ID A0A1R3HEJ0_9ROSI Unreviewed; 807 AA.
AC A0A1R3HEJ0;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=COLO4_29451 {ECO:0000313|EMBL:OMO68718.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMO68718.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO68718.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AWUE01020359; OMO68718.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3HEJ0; -.
DR STRING; 93759.A0A1R3HEJ0; -.
DR OrthoDB; 1201185at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 77..107
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 108..142
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 240..274
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 344..374
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 375..409
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 477..511
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 614..648
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 692..765
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 807 AA; 90445 MW; 88546D6F041C9685 CRC64;
MNVPNPDMPT LSYHTACLLQ ESLKCKDLFA GKSIHGRIVK SGLHFSVFLM NNLMNFYSKT
GSFSYAHSVF DEMPVKTIHS WNTLLSAYSK QGKMAEANEI FNRIPNPDSV SWSTLIVGYN
QMGRFKSAIK VFSEMIKERV TPSEYTMTSV LASCAAIEAL YIGRKVHSFV VKFGLSNFVS
VTNSLLNMYA KSGDPMMTMV IFDRMGYRDT SSLNVMVSLH MQYGQVDLAR EKFERMNERD
IVTWNSMIAG YNQHGYDLDA LATFGNMLRD SLLFPDKFTF INALSACANL EMLKVGKQIH
ACIVSMQFDI NGPVGNALIS MYAKSGGVHI AQKIVEHAGM SNLDVIAFTS LLDGYIKLGD
IEPARQIFDS LRDRDVVAWT AMIVGYLQNG LNTDALKLFR LMVRDGPKPN SFTLAAMLSV
SSSFTSLSHG KQIHAIAIRT GQASSVSVNN ALITMYARTG SIKYARLVFS RIHRFRDTVS
WTSMIMALAQ HGFGEEALEL FENLLAAGVK PDHITYVGVL SACTHVGLVE QGRRYYNMMK
NVHKIEPTLS HYSLMVDLLG RAGLVQEAYD FIKKMPIEPD VITWGSLLSS CKVYKNVELG
RVAAERLLHI DPENSGAYSA LANLYAVCGK WEDAAKTRKL MKDGGVKKEQ GISWVQIKNK
VHVFGADDVL HEQKDEVYKK ISKIWEDIKK MGFVPDTAAV MHDLEEEVKE QMLRHHSEKL
AIAFALMNTP QNTTLRIMKN LRVCNDCHSA IKFISKLSGR EIILSIVEGK MQYLFDENGK
RCLDDFARNG VVWTLPSRGF ECYNGTK
//
