ID A0A1R3HK47_COCAP Unreviewed; 504 AA.
AC A0A1R3HK47;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=PGG domain-containing protein {ECO:0000259|Pfam:PF13962};
GN ORFNames=CCACVL1_18714 {ECO:0000313|EMBL:OMO70658.1};
OS Corchorus capsularis (Jute).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO70658.1, ECO:0000313|Proteomes:UP000188268};
RN [1] {ECO:0000313|EMBL:OMO70658.1, ECO:0000313|Proteomes:UP000188268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC TISSUE=Whole seedling {ECO:0000313|EMBL:OMO70658.1};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT "Corchorus capsularis genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO70658.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AWWV01011778; OMO70658.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3HK47; -.
DR STRING; 210143.A0A1R3HK47; -.
DR EnsemblPlants; OMO70658; OMO70658; CCACVL1_18714.
DR Gramene; OMO70658; OMO70658; CCACVL1_18714.
DR OMA; NNICHAG; -.
DR OrthoDB; 303440at2759; -.
DR Proteomes; UP000188268; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR026961; PGG_dom.
DR PANTHER; PTHR24128:SF96; ANK_REP_REGION DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24128; HOMEOBOX PROTEIN WARIAI; 1.
DR Pfam; PF12796; Ank_2; 2.
DR Pfam; PF13962; PGG; 1.
DR SMART; SM00248; ANK; 5.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR PROSITE; PS50297; ANK_REP_REGION; 2.
DR PROSITE; PS50088; ANK_REPEAT; 3.
PE 4: Predicted;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW ProRule:PRU00023}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000188268};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 372..392
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 404..429
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 454..474
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 42..74
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 79..108
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 110..132
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 303..427
FT /note="PGG"
FT /evidence="ECO:0000259|Pfam:PF13962"
SQ SEQUENCE 504 AA; 55633 MW; 58365F32D9F06CE1 CRC64;
MSCNDNKLAQ LYEAALSGSV PTLTSLIGND PQILERVSLS PNPETPLHIS ALAGHVEFTK
ALLTRKPELA SRLDSLKCSP LHLASAEGHA EIVKALLQVD KNVCLVADAE GRIPLHLAAM
RGNVDVIQQL VKAQPKSIRE KVNGNYTVLH LCVQYNQLEA LKLLVTLVKG NHGHLFDFRD
HGGNTILHLA VMLRQSETIR YLVSILETKA EVNTLRNNIG MSALDVLDYG ARDFKYLEIR
DILPTAVGVG ENNIIITKNS TSGENQMEQE GGAGGGGADG FMSKLRRKLS FGYRYLFKRL
DDDWVKNMQK SLMVVATLTA TMSFQVATNP PGGVWQEHYN STTMEVCKLG KNNICHAGTA
VFGYTHPDDY QLLMNCATLS FVTSLVVVLL AISGIPLKNK LCTWLWILAM VVSISSTIAT
YFLAMVMLAP APVNDYKILK AWTRPFARPE GKGFRTWFVI VGVALVYAAI RLLLWLHSKR
DYILSCFRSN NTSPSRPKLP ISNI
//
