ID A0A1R3HMH8_COCAP Unreviewed; 379 AA.
AC A0A1R3HMH8;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=Bromo domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CCACVL1_18115 {ECO:0000313|EMBL:OMO71637.1};
OS Corchorus capsularis (Jute).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO71637.1, ECO:0000313|Proteomes:UP000188268};
RN [1] {ECO:0000313|EMBL:OMO71637.1, ECO:0000313|Proteomes:UP000188268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC TISSUE=Whole seedling {ECO:0000313|EMBL:OMO71637.1};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT "Corchorus capsularis genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO71637.1}.
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DR EMBL; AWWV01011566; OMO71637.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3HMH8; -.
DR STRING; 210143.A0A1R3HMH8; -.
DR EnsemblPlants; OMO71637; OMO71637; CCACVL1_18115.
DR Gramene; OMO71637; OMO71637; CCACVL1_18115.
DR OMA; IVPNNIN; -.
DR OrthoDB; 152619at2759; -.
DR Proteomes; UP000188268; Unassembled WGS sequence.
DR Gene3D; 1.20.1270.220; -; 1.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR027353; NET_dom.
DR InterPro; IPR038336; NET_sf.
DR PANTHER; PTHR45926; OSJNBA0053K19.4 PROTEIN; 1.
DR PANTHER; PTHR45926:SF1; TRANSCRIPTION FACTOR GTE6; 1.
DR Pfam; PF17035; BET; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 1.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
DR PROSITE; PS51525; NET; 1.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|PROSITE-ProRule:PRU00035};
KW Reference proteome {ECO:0000313|Proteomes:UP000188268}.
FT DOMAIN 116..191
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 260..341
FT /note="NET"
FT /evidence="ECO:0000259|PROSITE:PS51525"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 57..95
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 338..379
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 69..95
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 341..356
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 357..371
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 379 AA; 43805 MW; 4613D0660763E171 CRC64;
MEPVMASVPD FGNAEMGIPK DNNAETDMYR CRVNEIFQKV DELEQKVNEV EQFYLNSNKK
QQSSSRGSSI GKERDKERHV PSIKKQQQDA SRREAAAAKR MQELMRQFGT IVRQITQHKW
AWPFMQPVDV KGLGLHDYYE VIEKPMDFST IKNQMEAKDG TGYKNVREIC SDVRLVFNNA
MKYNDEGSDV HLMAKTLLEK FEEKWQQLLP KVIEEEKRRE EEEAEAQLDM QLVREAAHAK
MVRELSNELY ELDTHLEQLR ETVVHKCRKM STEEKRNLGT AISRLSTEDL NKALEIIAQS
NPGFQAMAEE VEIDIDAQRE STLWRLKFFV RDALEGRDKN AASNGGNNNN NNSNNNKRKK
EICDANVKTA KKKSKKPSS
//
