ID   A0A1R3HVU1_COCAP        Unreviewed;       320 AA.
AC   A0A1R3HVU1;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   27-MAR-2024, entry version 22.
DE   SubName: Full=Ubiquitin fusion degradation protein UFD1 {ECO:0000313|EMBL:OMO74390.1};
GN   ORFNames=CCACVL1_16754 {ECO:0000313|EMBL:OMO74390.1};
OS   Corchorus capsularis (Jute).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX   NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO74390.1, ECO:0000313|Proteomes:UP000188268};
RN   [1] {ECO:0000313|EMBL:OMO74390.1, ECO:0000313|Proteomes:UP000188268}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC   TISSUE=Whole seedling {ECO:0000313|EMBL:OMO74390.1};
RA   Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA   Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA   Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT   "Corchorus capsularis genome sequencing.";
RL   Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OMO74390.1}.
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DR   EMBL; AWWV01011111; OMO74390.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1R3HVU1; -.
DR   STRING; 210143.A0A1R3HVU1; -.
DR   EnsemblPlants; OMO74390; OMO74390; CCACVL1_16754.
DR   Gramene; OMO74390; OMO74390; CCACVL1_16754.
DR   OMA; WMMQQLC; -.
DR   OrthoDB; 1125766at2759; -.
DR   Proteomes; UP000188268; Unassembled WGS sequence.
DR   GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR   GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
DR   Gene3D; 3.10.330.10; -; 1.
DR   Gene3D; 2.40.40.50; Ubiquitin fusion degradation protein UFD1, N-terminal domain; 1.
DR   InterPro; IPR004854; Ufd1-like.
DR   InterPro; IPR042299; Ufd1-like_Nn.
DR   PANTHER; PTHR12555; UBIQUITIN FUSION DEGRADATON PROTEIN 1; 1.
DR   PANTHER; PTHR12555:SF29; UBIQUITIN-DEPENDENT PROTEOLYTIC PROTEIN-RELATED; 1.
DR   Pfam; PF03152; UFD1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000188268}.
FT   REGION          184..320
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        237..274
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        286..310
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   320 AA;  35534 MW;  CA9EFBBF4D714936 CRC64;
     MFFDGYGYHG TSFEQSYRCY PASFIEKPQI ESGDKIIMPP SALDRLASLH IDYPMLFELR
     NESAERVSHC GVLEFIAEEG MIYMPYWMME NLLLQEGDIV RVKNVTLPKG TYVKLQPHTK
     DFLDISNPKA ILETTLRNYS CLTTGDSIMV AYNNKKYYID IIETKPSNAI SIIETDCEVD
     FAPPLDYKEP ERPAVATSSS KALPQGEDAP AEAEPKFSPF TGAGRRLDGK PLKEQPAPVS
     SSVSKGKGPA VSNGNNSQPL GSSTQSTARQ AQGKLVFGSN VGRPKETKQE TGKEPKQEQP
     EKKEEPKFQP FSGRKYSLKG
//