ID A0A1R3HWC3_COCAP Unreviewed; 894 AA.
AC A0A1R3HWC3;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=CLIP-associated protein {ECO:0000313|EMBL:OMO74578.1};
GN ORFNames=CCACVL1_16611 {ECO:0000313|EMBL:OMO74578.1};
OS Corchorus capsularis (Jute).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO74578.1, ECO:0000313|Proteomes:UP000188268};
RN [1] {ECO:0000313|EMBL:OMO74578.1, ECO:0000313|Proteomes:UP000188268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC TISSUE=Whole seedling {ECO:0000313|EMBL:OMO74578.1};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT "Corchorus capsularis genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the importin beta family. Importin beta-2
CC subfamily. {ECO:0000256|ARBA:ARBA00038423}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO74578.1}.
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DR EMBL; AWWV01011091; OMO74578.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3HWC3; -.
DR STRING; 210143.A0A1R3HWC3; -.
DR EnsemblPlants; OMO74578; OMO74578; CCACVL1_16611.
DR Gramene; OMO74578; OMO74578; CCACVL1_16611.
DR OMA; AQEGAMS; -.
DR OrthoDB; 276400at2759; -.
DR Proteomes; UP000188268; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0031267; F:small GTPase binding; IEA:InterPro.
DR GO; GO:0006606; P:protein import into nucleus; IEA:InterPro.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR001494; Importin-beta_N.
DR InterPro; IPR040122; Importin_beta.
DR PANTHER; PTHR10527:SF3; FI21453P1-RELATED; 1.
DR PANTHER; PTHR10527; IMPORTIN BETA; 1.
DR Pfam; PF13513; HEAT_EZ; 1.
DR Pfam; PF03810; IBN_N; 1.
DR SMART; SM00913; IBN_N; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR PROSITE; PS50166; IMPORTIN_B_NT; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000188268}.
FT DOMAIN 38..106
FT /note="Importin N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS50166"
FT REGION 329..361
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 335..354
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 894 AA; 99307 MW; 42AC734B5C2E0371 CRC64;
MAATGSVSWQ PQEEGLKEIC GLLEQQISPS SSADKSQIWQ QLQHYSQFPD FNNYLAFILA
RAEGKSVEIR QAAGLLLKNN LRTAYKLMAP AHQQYIKSEL LPCLGAGDKH IRSTVGTIVT
VIVQQGGIPG WPELLQALVN CLDSNDLNLM EGAMDALSKI CEDIPQVLDS DVPGLAERPI
NIFLPRLFQF FQSPHASLRK LSLGSVNQYI MLMPSALYTS MDKYLQGLFV LANDPAAEVR
KLVCAAFVQI IEVRPSFLEP HLKNVIEYML LVNKDSDEEV ALEAGEFWSA YCEAQLPVDE
LREYLPRLIP ILLSNMAYAD DDESLLDAED DESLPDRDQD LKPRFHTSRF HGSDDAEDDD
DDDSFNVWNL RKCSAAALDA LSNVFGDEIL PTLMPIIQAK LSASGDEAWK DREAAVLALG
AVGEGCINGL YPHLSEIVAF LIPLLDDKFP LIRSISCWTL SRFSKYIVQD SGHQKGYEQF
DAALMGLLRR ILDTNKRVQE AACSAFATLE EEAAEELAPR LEIILQHLMC AFGKYQRRNL
RIVYDAIGTL ADAVGGELNQ PVYLEILMPP LIAKWQQVSN SDKDLFPLLE CFTSIAQALG
TGFSQFAQPV FQRCINIIQT QQLAKADPVS AGVQYDKEFI VCSLDLLSGL AEGLGSGIES
LVSQSNLRDL LLQCCMDDAS DVRQSAFALL GDLSRVCPIH LQPRLSEFLD IAAKQLNNPN
LRETISVANN ACWAIGELAI KVRQEISPIV MTVIQCLVPI LQHAEGLNKS LVENSAITLG
RLAWVCPELV SPHMEHFMQS WCISLSTIRD DIEKEDAFRG LCAMVRANPS GALSSLVFMC
KAIASWHEIR SEELHNEVCQ VLHGYKQMLR NGAWDQCMSA LEPPVKDKLS KYQV
//
