ID   A0A1R3I468_COCAP        Unreviewed;       839 AA.
AC   A0A1R3I468;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   27-MAR-2024, entry version 34.
DE   RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=CCACVL1_15046 {ECO:0000313|EMBL:OMO77370.1};
OS   Corchorus capsularis (Jute).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX   NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO77370.1, ECO:0000313|Proteomes:UP000188268};
RN   [1] {ECO:0000313|EMBL:OMO77370.1, ECO:0000313|Proteomes:UP000188268}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC   TISSUE=Whole seedling {ECO:0000313|EMBL:OMO77370.1};
RA   Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA   Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA   Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT   "Corchorus capsularis genome sequencing.";
RL   Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OMO77370.1}.
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DR   EMBL; AWWV01010752; OMO77370.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1R3I468; -.
DR   STRING; 210143.A0A1R3I468; -.
DR   EnsemblPlants; OMO77370; OMO77370; CCACVL1_15046.
DR   Gramene; OMO77370; OMO77370; CCACVL1_15046.
DR   OMA; CEANASC; -.
DR   OrthoDB; 998957at2759; -.
DR   Proteomes; UP000188268; Unassembled WGS sequence.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR   Gene3D; 2.60.120.650; Cupin; 1.
DR   InterPro; IPR003347; JmjC_dom.
DR   InterPro; IPR003349; JmjN.
DR   InterPro; IPR004198; Znf_C5HC2.
DR   PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR   PANTHER; PTHR10694:SF33; TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN _ ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN; 1.
DR   Pfam; PF02373; JmjC; 1.
DR   Pfam; PF02375; JmjN; 1.
DR   Pfam; PF02928; zf-C5HC2; 1.
DR   SMART; SM00558; JmjC; 1.
DR   SMART; SM00545; JmjN; 1.
DR   SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR   PROSITE; PS51184; JMJC; 1.
DR   PROSITE; PS51183; JMJN; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000188268};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          61..102
FT                   /note="JmjN"
FT                   /evidence="ECO:0000259|PROSITE:PS51183"
FT   DOMAIN          205..378
FT                   /note="JmjC"
FT                   /evidence="ECO:0000259|PROSITE:PS51184"
FT   REGION          633..671
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        657..671
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   839 AA;  94109 MW;  01AAFDC5DEC86A21 CRC64;
     MSRSGGDALR VSASCGMRLH GNAESFSRSN GASTEKDIFC KRKVDKFDTS DLEWTDKIPE
     CPVYCPTKEE FEDPLVYLQK IAPEASRYGI CKIISPLSAT VPAGVVLMKE KAGFKFTTRV
     QPLRLAEWDT DDRVTFFMSG RNYTFRDFEK MANKVFARRY YSAGCLPETY MEKEFWHEIA
     CGKTESVEYA CDVEGSAFSS SPNDPLGTSK WNLKKLSRLS KSTLRLLETA IPGVTDPMLY
     IGMLFSMFAW HVEDHYLYSI NYHHCGASKT WYGIPGHAAL KFEKVVKEHV YTNDILSTDG
     EDGAFDVLLG KTTMFPPNIL LEHDVPVYKA VQKPGEFVIT FPRAYHAGFS HGFNCGEAVN
     FAIGDWFPLG AVASLRYAHL NRVPLLPHEE LLCKEAMLLH TSLELEDLEY SPADLASHHS
     IKVSFVKLMR FLHRARWSVM KSKACTSVSS NFYRTIVCTL CKRDCYVAFI NCSCYLHPVC
     LRHDIKSLKL PCGNHHCLFL RDDVVEMEAA ALKFEQEDAI SEEVERLVEN GDDLYSYPLA
     NKFQTDVDDG YFPYCEINVV LNPEIAAITT TMGQPTEHVE PTMSHDTSFA ASTLCSFVEQ
     VGSSAKNVQG LGNLGNANGK EFSEEFSRST YESSASCLSR EDRPGIHPSN NVHEPESRST
     GDQDSDDSDS EIFRVKRRSF LKIEKRNGLK RLKRLQHEGR CGHSEGCRSD EPIRSTKPTY
     DCKEAPENGV KDRLGRGGTL PISIKYKKLG NSEEATMVRQ REQQRSDSRF QHEIGKSMRE
     PPSLEIGPKR LKVRGPTYLG SESSRASKFG GQIARAAILV VLSGRGVFPS LAGEPSCKN
//