ID A0A1R3IAN6_COCAP Unreviewed; 393 AA.
AC A0A1R3IAN6;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=GDT1 family protein {ECO:0000256|RuleBase:RU365102};
GN ORFNames=CCACVL1_13522 {ECO:0000313|EMBL:OMO79663.1};
OS Corchorus capsularis (Jute).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO79663.1, ECO:0000313|Proteomes:UP000188268};
RN [1] {ECO:0000313|EMBL:OMO79663.1, ECO:0000313|Proteomes:UP000188268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC TISSUE=Whole seedling {ECO:0000313|EMBL:OMO79663.1};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT "Corchorus capsularis genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141,
CC ECO:0000256|RuleBase:RU365102}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141, ECO:0000256|RuleBase:RU365102}.
CC -!- SIMILARITY: Belongs to the GDT1 family. {ECO:0000256|ARBA:ARBA00009190,
CC ECO:0000256|RuleBase:RU365102}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO79663.1}.
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DR EMBL; AWWV01010370; OMO79663.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3IAN6; -.
DR EnsemblPlants; OMO79663; OMO79663; CCACVL1_13522.
DR Gramene; OMO79663; OMO79663; CCACVL1_13522.
DR OMA; QSTNEEW; -.
DR OrthoDB; 36301at2759; -.
DR Proteomes; UP000188268; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR001727; GDT1-like.
DR InterPro; IPR049555; GDT1-like_CS.
DR PANTHER; PTHR12608:SF6; PROTEIN PAM71, CHLOROPLASTIC; 1.
DR PANTHER; PTHR12608; TRANSMEMBRANE PROTEIN HTP-1 RELATED; 1.
DR Pfam; PF01169; UPF0016; 2.
DR PROSITE; PS01214; UPF0016; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU365102};
KW Reference proteome {ECO:0000313|Proteomes:UP000188268};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW ECO:0000256|RuleBase:RU365102};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|RuleBase:RU365102}.
FT TRANSMEM 211..236
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU365102"
FT TRANSMEM 256..274
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU365102"
FT TRANSMEM 295..319
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU365102"
FT TRANSMEM 339..359
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU365102"
FT TRANSMEM 371..392
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU365102"
FT COILED 271..298
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 393 AA; 42111 MW; 5965A36EF1D305C1 CRC64;
MRGITLRESG LVLHSLLPPC PKPPKSFNSH FLSLSKKHSS KLSSRHQRLL LSRCYKNWVQ
STNEEWFGGL LEKVAERQHE LEYRYLDCKN REETIALGHK SEDCCVSDHA PVINNLRRGN
YVPSNLAVSN TLFNNNLLKF MVLFGLLTFQ SSEPAVAVSD IATGSLSIPY IGDLGDISTG
FASAFLLIFF SELGDKTFFI AALLAARNSA AVTFIGTFGA LAVMTIISVV LGRTFHYVDE
ILPFRFGAAD LPIDDIAAVC LLVYFGVSTL LDAASSDNQK AEDEQKEAEL AVSEFSGNGA
GILAAANTVI STFVLVFVAE WGDKSFFSTI ALAAASSPLG VIAGALAGHG VATLLAVLGG
SLLGTFLSEK AIAYIGGTLF LVFAAVTLVE IVN
//
