ID A0A1R3IBZ9_COCAP Unreviewed; 918 AA.
AC A0A1R3IBZ9;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=Leucine-rich repeat-containing N-terminal plant-type domain-containing protein {ECO:0000259|Pfam:PF08263};
GN ORFNames=CCACVL1_13174 {ECO:0000313|EMBL:OMO80094.1};
OS Corchorus capsularis (Jute).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO80094.1, ECO:0000313|Proteomes:UP000188268};
RN [1] {ECO:0000313|EMBL:OMO80094.1, ECO:0000313|Proteomes:UP000188268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC TISSUE=Whole seedling {ECO:0000313|EMBL:OMO80094.1};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT "Corchorus capsularis genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|ARBA:ARBA00004251};
CC Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004251}.
CC -!- SIMILARITY: Belongs to the RLP family. {ECO:0000256|ARBA:ARBA00009592}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO80094.1}.
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DR EMBL; AWWV01010327; OMO80094.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3IBZ9; -.
DR STRING; 210143.A0A1R3IBZ9; -.
DR EnsemblPlants; OMO80094; OMO80094; CCACVL1_13174.
DR Gramene; OMO80094; OMO80094; CCACVL1_13174.
DR OMA; GILEMDP; -.
DR OrthoDB; 657118at2759; -.
DR Proteomes; UP000188268; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 3.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR013210; LRR_N_plant-typ.
DR InterPro; IPR046956; RLP23-like.
DR PANTHER; PTHR48061; LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED; 1.
DR PANTHER; PTHR48061:SF12; VOC DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00560; LRR_1; 4.
DR Pfam; PF13855; LRR_8; 2.
DR Pfam; PF08263; LRRNT_2; 1.
DR PRINTS; PR00019; LEURICHRPT.
DR SMART; SM00365; LRR_SD22; 4.
DR SMART; SM00369; LRR_TYP; 5.
DR SUPFAM; SSF52058; L domain-like; 2.
DR SUPFAM; SSF52047; RNI-like; 1.
DR PROSITE; PS51450; LRR; 1.
PE 3: Inferred from homology;
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000188268};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}; Signal {ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..30
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 31..918
FT /note="Leucine-rich repeat-containing N-terminal plant-type
FT domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5013204097"
FT TRANSMEM 844..867
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 35..80
FT /note="Leucine-rich repeat-containing N-terminal plant-
FT type"
FT /evidence="ECO:0000259|Pfam:PF08263"
SQ SEQUENCE 918 AA; 101485 MW; 40BB6CA1A66FC851 CRC64;
MGSGSALYFS VTTSLFHLLF LFFLVSSVEA SCYPDDRSAL LQLKQSFVIN TSASSNPQAY
AKTETWESGD CCSWDGVKCD NGTGHVISLD LGSSFLYGSL NSSSSLFRLV QLQSLNLFDN
SLMNSEIPSE IRFLSRLKSL VLSYANFSGQ VPSGVLELSE LEVLDLSGNP LKLGKLGLTS
LLEKLTNLQA LNLAHILKLD SNLELGGYLP EIDDGNHSLL ELSLASTSFS RNLPESIGNF
KSLQQLDIRK CLFTGKTNLI YLDLSNTNLT GTIPSSLQNL TQIAYLYLKA NGLDGQIPPW
IGNLRKLVEI TLSANFLTGP VPESIFKLQN LQVLDLQINQ LNGFLNLDSF LELKNLTRLQ
LSGNNLSLLT GVRSINIVSP PKLKLLGLGT CNLSKFPDFL RSQDELEFLE LGDNRIHGLI
PKWFWTVGKE TLNYLNLGFN FLTGFEELPV VLPWTSLEVF NLESNMLQGS LPHPRPSIIL
YVVSNNSLSG EIPPTMLCNL SSLVALDLSD NNLTGALPRC LDSSSDSLII LNLRNNHFSG
DIPWSYSKSC ALWMMDLSQN QLQGTIPRSL AHCAMLESLN LGNNLINDSF PSWLGTLPNL
KILILRANEL GGAIDQKPQA KPEFSKLQVI DLSANSLRGK LPSDYFKIWN AMQFDNTNSS
SLYMNANTSF QGTEFSFSTF YTYVAKLANK GRDLDYDKVP DSLFAVDLSS NKFEGEIPES
IGKLKLIRVL NLSNNNLIGH IPSSLGELTN LESLDLSGNN LSGEIPQQLG RLNFLAHFNV
SYNNLEGPIP RAQQFGTFNN DSYVGNSRLC GYPLSEKCGN TDENFPPPPL EEEEDEGIAS
AFKFGWRVVL TGYGAGLIIG LSLGYNFRPR KPERFRNWQA SSNTNTNNWS GSRSTSWYGG
SFSFIWNKVS WHNRTSSS
//
