ID   A0A1R3IJ93_COCAP        Unreviewed;       514 AA.
AC   A0A1R3IJ93;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   03-MAY-2023, entry version 21.
DE   RecName: Full=SKI-interacting protein SKIP SNW domain-containing protein {ECO:0000259|Pfam:PF02731};
GN   ORFNames=CCACVL1_11828 {ECO:0000313|EMBL:OMO82662.1};
OS   Corchorus capsularis (Jute).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX   NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO82662.1, ECO:0000313|Proteomes:UP000188268};
RN   [1] {ECO:0000313|EMBL:OMO82662.1, ECO:0000313|Proteomes:UP000188268}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC   TISSUE=Whole seedling {ECO:0000313|EMBL:OMO82662.1};
RA   Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA   Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA   Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT   "Corchorus capsularis genome sequencing.";
RL   Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the SNW family. {ECO:0000256|ARBA:ARBA00010197}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OMO82662.1}.
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DR   EMBL; AWWV01009973; OMO82662.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1R3IJ93; -.
DR   STRING; 210143.A0A1R3IJ93; -.
DR   EnsemblPlants; OMO82662; OMO82662; CCACVL1_11828.
DR   Gramene; OMO82662; OMO82662; CCACVL1_11828.
DR   OMA; YGQRRGW; -.
DR   OrthoDB; 5490078at2759; -.
DR   Proteomes; UP000188268; Unassembled WGS sequence.
DR   GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR   InterPro; IPR017862; SKI-int_prot_SKIP.
DR   InterPro; IPR004015; SKI-int_prot_SKIP_SNW-dom.
DR   PANTHER; PTHR12096; NUCLEAR PROTEIN SKIP-RELATED; 1.
DR   PANTHER; PTHR12096:SF0; SNW DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF02731; SKIP_SNW; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000188268}.
FT   DOMAIN          192..345
FT                   /note="SKI-interacting protein SKIP SNW"
FT                   /evidence="ECO:0000259|Pfam:PF02731"
FT   REGION          224..257
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          287..341
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          408..514
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        408..461
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   514 AA;  57644 MW;  80EFBEB1820B4A5E CRC64;
     MTALKDLKDL LPAAKNSTAT YYDHANDPWF KQRFSAPSEE EKATAALKAK PVPPYLKREG
     FVPRKVEDFG DGGAFPEIHI AQYPLGMGRE KGANPRSKIL PVTVDAHGNL AYDAIVKQSE
     NAKKIVYTQH TDLIPKIAKN DVDGGNEVKE EEMQKEIEET MLETKAALEK IVNVKLSAAQ
     PKNVPNQSSD SKYIKYKPSQ QSAAFNSGAN ERIIRMVEMP VDPLEPPKFK HKRVPKASGS
     PPVPVMHSPP RPVTVKDQQD WKIPPCISNW KNPKGYTIPL DKRLAADGRG LQEESKEERE
     ERLKREKIRE ERRRERERER RLEAKDAAMG KKSKITRDRD RDISEKVALG MASTGAGRGG
     EVMYDQRLFN QEKGMDSGFA TDDQYNIYDK GLFTAQPTLS TLYRPKKDMD SEMYGGADEQ
     LDKLMKTDRF KPDKQFGGTS ERSGPRDKPV EFEKEAEEAD PFGLDQFLTE VKKGKKAMDK
     VGSGGTMKAS AGSSMRDGYE GGSSRSRIGF ERGH
//