ID A0A1R3IQD5_9ROSI Unreviewed; 535 AA.
AC A0A1R3IQD5;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=RNase III domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=COLO4_21840 {ECO:0000313|EMBL:OMO84793.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMO84793.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO84793.1}.
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DR EMBL; AWUE01017805; OMO84793.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3IQD5; -.
DR STRING; 93759.A0A1R3IQD5; -.
DR OrthoDB; 342391at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd00593; RIBOc; 1.
DR Gene3D; 3.30.160.20; -; 1.
DR Gene3D; 3.40.30.10; Glutaredoxin; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.10.1520.10; Ribonuclease III domain; 1.
DR InterPro; IPR014720; dsRBD_dom.
DR InterPro; IPR004045; Glutathione_S-Trfase_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000999; RNase_III_dom.
DR InterPro; IPR036389; RNase_III_sf.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR PANTHER; PTHR14950; DICER-RELATED; 1.
DR PANTHER; PTHR14950:SF54; RNASE II-LIKE 1; 1.
DR Pfam; PF00035; dsrm; 1.
DR Pfam; PF02798; GST_N; 1.
DR Pfam; PF00636; Ribonuclease_3; 1.
DR SMART; SM00535; RIBOc; 1.
DR SUPFAM; SSF54768; dsRNA-binding domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF69065; RNase III domain-like; 1.
DR SUPFAM; SSF52833; Thioredoxin-like; 1.
DR PROSITE; PS50404; GST_NTER; 1.
DR PROSITE; PS00517; RNASE_3_1; 1.
DR PROSITE; PS50142; RNASE_3_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 1..66
FT /note="GST N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS50404"
FT DOMAIN 293..433
FT /note="RNase III"
FT /evidence="ECO:0000259|PROSITE:PS50142"
SQ SEQUENCE 535 AA; 60756 MW; 2133FFF4AA909AC9 CRC64;
MVLFFPGFLG LSYEYKAVNL AKGEQFTPEF EKLNPLHVVP YLVDGDLVVS DSYAILMLEE
KYLQRTFLPA DPQQKAPNLQ EAQHILSKHV ELLWLMENMD TLKAAIRLRA GDALFGTIER
HEGSHFQVNL HIMTARTGLS LLLAMCKLAI ARALYQNSSI LVLDEATSTL DSRSESLVRQ
AVELLMENHT VLVIAHRLET VLMADRVFHL QDGKLEELTQ STLLVARAER PVETFPGAQI
AGVFRGLLNP RMTAMDGLDD VGRLDGKLKK LQVVNGDDEF ESNSRVESIE PSLEEVEGIL
GYVFNNKSLL EEAFTHASLG ESFSNERLEY VGDSVLNLIF TKEQFFKYPD LPPGALTRLR
AANVDTEKLA RVTVKHGLHR YLRHKKPLLE EQIRQFSEEI QRYPLHSNGL VDVPKALADL
VESTIGAVYI DSNFSIDIVW KVFKDLLEPI INRETIKIHP VTQLYEVCQK RNLKVRFVDL
WKENTCFDVF VDEQFVGRGT CSLKKEIAHN RAAKDALDNI WRILDQKDNA QISFT
//
