ID   A0A1R3IQS4_COCAP        Unreviewed;       916 AA.
AC   A0A1R3IQS4;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   27-MAR-2024, entry version 25.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=CCACVL1_10558 {ECO:0000313|EMBL:OMO84916.1};
OS   Corchorus capsularis (Jute).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX   NCBI_TaxID=210143 {ECO:0000313|EMBL:OMO84916.1, ECO:0000313|Proteomes:UP000188268};
RN   [1] {ECO:0000313|EMBL:OMO84916.1, ECO:0000313|Proteomes:UP000188268}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. CVL-1 {ECO:0000313|Proteomes:UP000188268};
RC   TISSUE=Whole seedling {ECO:0000313|EMBL:OMO84916.1};
RA   Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA   Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA   Rashid M.M., Khan S.A., Rahman M.S., Alam M.;
RT   "Corchorus capsularis genome sequencing.";
RL   Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OMO84916.1}.
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DR   EMBL; AWWV01009658; OMO84916.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1R3IQS4; -.
DR   EnsemblPlants; OMO84916; OMO84916; CCACVL1_10558.
DR   Gramene; OMO84916; OMO84916; CCACVL1_10558.
DR   OrthoDB; 449202at2759; -.
DR   Proteomes; UP000188268; Unassembled WGS sequence.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR012881; DUF1685.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 5.
DR   PANTHER; PTHR47933; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR47933:SF2; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2; 1.
DR   Pfam; PF07939; DUF1685; 1.
DR   Pfam; PF01535; PPR; 3.
DR   Pfam; PF13041; PPR_2; 2.
DR   PROSITE; PS51375; PPR; 4.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000188268};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          501..535
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          638..672
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          673..707
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          708..742
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REGION          15..55
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          139..169
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        29..43
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        148..163
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   916 AA;  103667 MW;  5E82D746427E63A9 CRC64;
     MVGISSQSES WLSITNSIDQ TNEDDTTADS ESFDLKRQDE TKIDQDADED DNNYSNSNIV
     DTITKKKKKN QVLLEGYVEA VDKEDELTRT KSLTDEDLDE LKGCLDLGFG FSYEEIPELC
     NTLPALELCY SMSQKYLDEH HKSPDTSPET TTEAVSSPIA NWKISSPGDH PEDVKARLKY
     WAQAVACTVR LCKLSNWDRL QGVGEEAEEE KDVSVLNRAS PTSWLQTSAF AEMITQFILP
     GIAEAVENEG KGKKQVKEEQ ACISLPNFSA CSWLALWRHG LLAFSSNLLQ FQTSSCFQCF
     SHSCQKPKTA ANHPQQLPPV LASEDVSSPA LLSTSSSLSA QILQCKDLDD LLEDYKDKLN
     SKLVLQVLMN YKHLGRVKTL EFFSWAGMQM GFQFDDCVIE YMADFLGRRK LFDDIKCFLL
     TILSHRGRLS CSVFSICIRF LGRQGRVAEA LSLFQEMETT FRCKPDNVVC NNILYVLCKK
     ATSGELIDLA LTIFHRIDVP DTYSYSNILV GLCKFGRLET ALQVFRKMDR AGLVPTRSAL
     NVLIGQFCLL SSKEGAIEKV RVKNVYRPFT ILVPNVSSSS RKGAIEPAVF VFCKVVDLGM
     LPSAFVILEL VSELCRLGKM EEAFKVVKAV EQRKMSCLEE CYSLLMQALC EHNWFEEASF
     LFGRMLSLGV KPRLVVYNSI ICMLSNAGNM DDAERVFKIM NKQRCLPDTV TYTALVHAYS
     KARNWEAAYS LLIEMLGLGL IPNLHTYNEV DKLLRENGKM DLCFKLESKM ETQILLKHCK
     VGQLEAAYEK LNSMIRKGFH PPVYACDAFQ QAFQKNEIFE SKMGQVEPFL WFLKHQGYAF
     FEQFEILLHL TKFHPVTGKH FYANGQFYLV LHMTSLYLEE IETRKLVPLM VEPSPIVGRD
     LLSERAPVQL NALSTN
//