ID A0A1R3JB11_9ROSI Unreviewed; 872 AA.
AC A0A1R3JB11;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=COLO4_17930 {ECO:0000313|EMBL:OMO92015.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMO92015.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO92015.1}.
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DR EMBL; AWUE01016401; OMO92015.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3JB11; -.
DR STRING; 93759.A0A1R3JB11; -.
DR OrthoDB; 455715at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 15.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF366; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR DMR1; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 3.
DR Pfam; PF13041; PPR_2; 6.
DR PROSITE; PS51375; PPR; 16.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 109..143
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 144..178
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 179..213
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 214..248
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 249..279
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 288..322
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 323..357
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 358..392
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 393..427
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 428..462
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 463..497
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 521..555
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 556..590
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 591..625
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 626..660
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 730..764
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 872 AA; 97819 MW; 5968E553A6CA4600 CRC64;
MGRTKLTQAL LKNSNNPKLA WQLFKRIQSS PTNPSFLPSV PTIARILISA KMLPEIDHLH
RLLLSSQPQQ GSLSSLVSLV KLLAKSGFLD NAFSQFQSVR VKFPQNLPSI CLYNVLFECC
IKEGRSDHVL WLYKDMVTAS VSPQTYTFNL LICGLCDLGH LEEARELFDK MSEKGCLPNE
FTFGILVRGY CRFGLADKGL ELLDEMKRFR FLPNRVVYNT LISSFCKEGK TDDAEKLVER
MREDGLLPDV VTFNSRISAL CRAGKILEAS RIFRDMQIDE ELGLPQPNVI TYNLMLEGFS
KQGMLQEAKT LVESMEKNGD LMNLESYNIW LLGLLRNGKL VEAHLVLKDM VNKGVAPNIY
SYNIVMDGLC KNGMLSDARM VMGFIISSGL SPDTVTYSTL LHGYCRKGKL YEANNILHEM
MRNGCFPNTY MCNILLHSLW KEGKISEAEE LLQKMNEKGY GVDTVTCNIV IDGLCKSGKL
DKAVEIANGM WTHGSAALGS LGNSFIGLVD DAHSSKRCVP DLVTYSIIIS ALCKAGRLDE
AKKKFKEMMG KDLQPDSVVF DIFIHIFCKE GKISSAFRVL KDMEKRGCNK SLQTYNSLIL
GLGSKNQIFE IYGLMDEMRE GGITPNVSTY NNIISCLCKS GKLQDTSSIL DEMVQKGVNP
NISSFKMLIE AFCKACDFGV AQELFEIALS ICGHKEAFYS LMFNQLLVGG QLSEAKLVFE
AALDRSFYLG GFLYKDLIEK LCQDEKLEEA SEILHKMIKR GYKFDPASFM PVVDELGKRG
HKHEADELAE KMMEMASDGR EGDKIYPNAR ESIRRKGTKV GADDWHTIVH RDDGSGIALK
ALKRVQKGWG QRSVSHLQPH KNEFLDHWES GG
//
