ID A0A1R3JDG7_9ROSI Unreviewed; 983 AA.
AC A0A1R3JDG7;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=26S proteasome regulatory subunit RPN10 {ECO:0000256|ARBA:ARBA00044341};
GN ORFNames=COLO4_17310 {ECO:0000313|EMBL:OMO92837.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMO92837.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the CTL (choline transporter-like) family.
CC {ECO:0000256|ARBA:ARBA00007168}.
CC -!- SIMILARITY: Belongs to the proteasome subunit S5A family.
CC {ECO:0000256|ARBA:ARBA00005574}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMO92837.1}.
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DR EMBL; AWUE01016326; OMO92837.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3JDG7; -.
DR OrthoDB; 298151at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
DR GO; GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR GO; GO:0006457; P:protein folding; IEA:InterPro.
DR CDD; cd22297; PSMD4_RAZUL; 1.
DR CDD; cd01452; VWA_26S_proteasome_subunit; 1.
DR Gene3D; 1.10.287.3990; -; 1.
DR Gene3D; 2.40.100.10; Cyclophilin-like; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR InterPro; IPR007603; Choline_transptr-like.
DR InterPro; IPR029000; Cyclophilin-like_dom_sf.
DR InterPro; IPR020892; Cyclophilin-type_PPIase_CS.
DR InterPro; IPR002130; Cyclophilin-type_PPIase_dom.
DR InterPro; IPR049590; PSMD4_RAZUL-like.
DR InterPro; IPR003903; UIM_dom.
DR InterPro; IPR002035; VWF_A.
DR InterPro; IPR036465; vWFA_dom_sf.
DR PANTHER; PTHR10223; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4; 1.
DR PANTHER; PTHR10223:SF0; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4; 1.
DR Pfam; PF04515; Choline_transpo; 1.
DR Pfam; PF00160; Pro_isomerase; 1.
DR Pfam; PF13519; VWA_2; 1.
DR PRINTS; PR00153; CSAPPISMRASE.
DR SMART; SM00726; UIM; 2.
DR SMART; SM00327; VWA; 1.
DR SUPFAM; SSF50891; Cyclophilin-like; 1.
DR SUPFAM; SSF53300; vWA-like; 1.
DR PROSITE; PS00170; CSA_PPIASE_1; 1.
DR PROSITE; PS50072; CSA_PPIASE_2; 1.
DR PROSITE; PS50330; UIM; 1.
DR PROSITE; PS50234; VWFA; 1.
PE 3: Inferred from homology;
KW Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Proteasome {ECO:0000256|ARBA:ARBA00022942};
KW Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW Rotamase {ECO:0000256|ARBA:ARBA00023110};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 303..331
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 352..378
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 407..440
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 556..576
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 588..608
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 50..211
FT /note="PPIase cyclophilin-type"
FT /evidence="ECO:0000259|PROSITE:PS50072"
FT DOMAIN 636..818
FT /note="VWFA"
FT /evidence="ECO:0000259|PROSITE:PS50234"
FT REGION 238..281
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 826..868
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 885..983
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 238..269
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 826..847
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 848..863
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 905..947
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 968..983
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 983 AA; 107622 MW; 6265F63286B550CF CRC64;
MRREISILVQ PRCLLLFVVL SIFVIFALST TKREEEKIVE EEHEITHRVY LDVDIDGQRV
GRIVIGLYGE VVPKTVENFR ALCTGEKGKG ASGKALHYKG TPFHRIVPGF VAQGGDIIHG
DGRGSESIYG GTFPDENFKI KHSHAGVVSM ANTGPDSNGS QFFITTVKAS WLDGEHVVFG
KVIQGMDIVY MIEGGAGTYS GKPRKKSSVS KDIFFFHRCF FSTLEFVAAM GSTEDEANTS
KPISLHDSSL PTEPLLSKPT TSSNYLSHPI EEPAQPDPSE PDPTQFLQIS FNYGPRPFKD
LPFLILFLLL VICTFGLAII GIIIWIIVAN WHRIELTIRI IGVASDALSK NLALFLVIPS
LTGGLVIYYA PIVVFLVFAR YNGKIVAKES NGEYTCVWKQ DSWVPAYFTL AILTMLWSLT
TMVEAQVYVI SGTIAQWYFC KDESKPKRSI RSSLRNAFGP SSGTVCLSGL LICAVRVVRA
AVDSARHEED VPGMVHLVLR CCVNTLLSAI EFLNKFTINF AAITGEAYCT SARMTYELLR
RNLLSAVFVE TISTRLLAGV IFVLSAIYAI IVWAILKGAS NLGDAAYIVA ALAWLLLIIV
LAFFVHVLDN VIDTVYVCYA IDRDRGEVYK QEVHEATMIC VDNSEWMRNG DYNPSRFQAQ
ADAVSLICGA KTQSNPENTV GILTMAGKGV RVLATPTSDL GKILSCMHGL EMGGEMNLAA
GIQIAQLALK HRQNKNQQQR IIVFAGSPIK YEKKTLEMIG KKLKKNSVAL DIVDFGEDED
GKPEKLEALL AAVNNNDTSH IVHVPAGQNA LSDVLIRVSM EEERARQEAA AKRAAEEASK
QEKGEEAQPQ SDSQNATTTT TEKAADPMDE DDALLKQALA LSMNIPGSDS SAADAEMSEA
TNDDQELALA LQMSMQESSK DSSGQTDVSK VLGDQSFMSS ILSSLPGVDP NDPNVKDLLA
SLPGQSESQE KKNEDEQQPK EEK
//
