ID A0A1R3K628_9ROSI Unreviewed; 303 AA.
AC A0A1R3K628;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 14.
DE SubName: Full=Zinc finger, RING-CH-type {ECO:0000313|EMBL:OMP02506.1};
GN ORFNames=COLO4_11042 {ECO:0000313|EMBL:OMP02506.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMP02506.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMP02506.1}.
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DR EMBL; AWUE01014625; OMP02506.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3K628; -.
DR STRING; 93759.A0A1R3K628; -.
DR OrthoDB; 2718337at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd16495; RING_CH-C4HC3_MARCH; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011016; Znf_RING-CH.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46347; RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN; 1.
DR PANTHER; PTHR46347:SF1; RING_FYVE_PHD ZINC FINGER SUPERFAMILY PROTEIN; 1.
DR Pfam; PF12906; RINGv; 1.
DR SMART; SM00744; RINGv; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51292; ZF_RING_CH; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 95..116
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 215..242
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1..73
FT /note="RING-CH-type"
FT /evidence="ECO:0000259|PROSITE:PS51292"
SQ SEQUENCE 303 AA; 33978 MW; FE7B301465096DB0 CRC64;
MSNESEELPL MAPPPMPEPG EIDLEAGRDF IAPCKCKGTA KYVHRECLDH WRAVKEGFAF
AHCTTCKAPY HLRVHVAADR KWRTLKFRFF VTRDILSIFL AVQLVITSLA YLVYLIDSYQ
QSWLRLAWGF DSELSFYYIC ESAMTWLSLV ENYVFVAVSQ EVPMMLMTGM KMCADCHLPG
TLCMWTDCTT CFESCASAAG ECGCLGGAGE AGLPLLFIMA LVVLGLFTVI GIFYSVLVAT
MVGQRIWQRH YHILAKRMLT KEYVVEDVDG EVTGSDWSPP PLPPEHVQQL KSLGLLSVFT
TAL
//
