ID A0A1R3K8B7_9ROSI Unreviewed; 86 AA.
AC A0A1R3K8B7;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=40S ribosomal protein S27 {ECO:0000256|RuleBase:RU000671};
GN ORFNames=COLO4_10472 {ECO:0000313|EMBL:OMP03331.1}, COLO4_13393
GN {ECO:0000313|EMBL:OMO99245.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMP03331.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:OMP03331.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Whole seedlings {ECO:0000313|EMBL:OMP03331.1};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:OMP03331.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Whole seedlings {ECO:0000313|EMBL:OMP03331.1};
RX PubMed=28134914;
RA Islam M.S., Saito J.A., Emdad E.M., Ahmed B., Islam M.M., Halim A.,
RA Hossen Q.M., Hossain M.Z., Ahmed R., Hossain M.S., Kabir S.M., Khan M.S.,
RA Khan M.M., Hasan R., Aktar N., Honi U., Islam R., Rashid M.M., Wan X.,
RA Hou S., Haque T., Azam M.S., Moosa M.M., Elias S.M., Hasan A.M.,
RA Mahmood N., Shafiuddin M., Shahid S., Shommu N.S., Jahan S., Roy S.,
RA Chowdhury A., Akhand A.I., Nisho G.M., Uddin K.S., Rabeya T., Hoque S.M.,
RA Snigdha A.R., Mortoza S., Matin S.A., Islam M.K., Lashkar M.Z., Zaman M.,
RA Yuryev A., Uddin M.K., Rahman M.S., Haque M.S., Alam M.M., Khan H.,
RA Alam M.;
RT "Comparative genomics of two jute species and insight into fibre
RT biogenesis.";
RL Nat. Plants 3:0-0(2017).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|RuleBase:RU000671};
CC Note=Binds 1 zinc ion per subunit. {ECO:0000256|RuleBase:RU000671};
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS27 family.
CC {ECO:0000256|ARBA:ARBA00010919, ECO:0000256|RuleBase:RU000671}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMP03331.1}.
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DR EMBL; AWUE01015163; OMO99245.1; -; Genomic_DNA.
DR EMBL; AWUE01014522; OMP03331.1; -; Genomic_DNA.
DR SMR; A0A1R3K8B7; -.
DR STRING; 93759.A0A1R3K8B7; -.
DR OrthoDB; 609089at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 2.20.25.100; Zn-binding ribosomal proteins; 1.
DR HAMAP; MF_00371; Ribosomal_S27e; 1.
DR InterPro; IPR000592; Ribosomal_eS27.
DR InterPro; IPR023407; Ribosomal_eS27_Zn-bd_dom_sf.
DR InterPro; IPR011332; Ribosomal_zn-bd.
DR PANTHER; PTHR11594; 40S RIBOSOMAL PROTEIN S27; 1.
DR PANTHER; PTHR11594:SF21; 40S RIBOSOMAL PROTEIN S27; 1.
DR Pfam; PF01667; Ribosomal_S27e; 1.
DR SUPFAM; SSF57829; Zn-binding ribosomal proteins; 1.
DR PROSITE; PS01168; RIBOSOMAL_S27E; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|RuleBase:RU000671};
KW Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW Ribonucleoprotein {ECO:0000256|RuleBase:RU000671};
KW Ribosomal protein {ECO:0000256|RuleBase:RU000671,
KW ECO:0000313|EMBL:OMP03331.1}; Zinc {ECO:0000256|RuleBase:RU000671};
KW Zinc-finger {ECO:0000256|RuleBase:RU000671}.
SQ SEQUENCE 86 AA; 9586 MW; C22337BB455B6F63 CRC64;
MVLQNDIDLL NPPAELEKKK HKLKRLVQSP NSFFMDVKCQ GCFNITTVFS HSQTVVVCGN
CQTVLCQPTG GRARLTEGCS FRKKGD
//
