ID A0A1R3KBC3_9ROSI Unreviewed; 694 AA.
AC A0A1R3KBC3;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=Double-stranded RNA-binding protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=COLO4_09700 {ECO:0000313|EMBL:OMP04391.1};
OS Corchorus olitorius.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus.
OX NCBI_TaxID=93759 {ECO:0000313|EMBL:OMP04391.1, ECO:0000313|Proteomes:UP000187203};
RN [1] {ECO:0000313|Proteomes:UP000187203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. O-4 {ECO:0000313|Proteomes:UP000187203};
RA Alam M., Haque M.S., Islam M.S., Emdad E.M., Islam M.M., Ahmed B.,
RA Halim A., Hossen Q.M.M., Hossain M.Z., Ahmed R., Khan M.M., Islam R.,
RA Rashid M.M., Khan S.A., Rahman M.S., Alam M., Yahiya A.S., Khan M.S.,
RA Azam M.S., Haque T., Lashkar M.Z.H., Akhand A.I., Morshed G., Roy S.,
RA Uddin K.S., Rabeya T., Hossain A.S., Chowdhury A., Snigdha A.R.,
RA Mortoza M.S., Matin S.A., Hoque S.M.E., Islam M.K., Roy D.K., Haider R.,
RA Moosa M.M., Elias S.M., Hasan A.M., Jahan S., Shafiuddin M., Mahmood N.,
RA Shommy N.S.;
RT "Corchorus olitorius genome sequencing.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OMP04391.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AWUE01014262; OMP04391.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1R3KBC3; -.
DR STRING; 93759.A0A1R3KBC3; -.
DR OrthoDB; 342391at2759; -.
DR Proteomes; UP000187203; Unassembled WGS sequence.
DR GO; GO:0043169; F:cation binding; IEA:InterPro.
DR GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd00593; RIBOc; 1.
DR Gene3D; 3.30.160.20; -; 2.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 1.10.1520.10; Ribonuclease III domain; 1.
DR InterPro; IPR006048; A-amylase/branching_C.
DR InterPro; IPR014720; dsRBD_dom.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR000999; RNase_III_dom.
DR InterPro; IPR036389; RNase_III_sf.
DR PANTHER; PTHR43651; 1,4-ALPHA-GLUCAN-BRANCHING ENZYME; 1.
DR PANTHER; PTHR43651:SF4; 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 3, CHLOROPLASTIC_AMYLOPLASTIC; 1.
DR Pfam; PF02806; Alpha-amylase_C; 1.
DR Pfam; PF14709; DND1_DSRM; 1.
DR Pfam; PF00636; Ribonuclease_3; 1.
DR SMART; SM00358; DSRM; 2.
DR SMART; SM00535; RIBOc; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF54768; dsRNA-binding domain-like; 2.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
DR SUPFAM; SSF69065; RNase III domain-like; 1.
DR PROSITE; PS50137; DS_RBD; 1.
DR PROSITE; PS00517; RNASE_3_1; 1.
DR PROSITE; PS50142; RNASE_3_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000187203};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00266}.
FT DOMAIN 364..506
FT /note="RNase III"
FT /evidence="ECO:0000259|PROSITE:PS50142"
FT DOMAIN 617..690
FT /note="DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50137"
SQ SEQUENCE 694 AA; 78354 MW; B1AFD2C250BBDA1F CRC64;
MAIWMYCNQY VDKDASMYLM LANEILHFFH PNIITIAEDA TFYPGLCEPT SQGGLGFDYY
VNLSASEMWS SLLESTPDHE WSMSKIISVL LGNRQYANKM IIYAENHNQS ISGGRSLAEI
LLGQGNEQAP LSDELLRRGS SLIKMIKLIT FTVGGRGYLN FMGNEFGHPK RVEFPMPSNK
FSFSLANRCW DLLDKEGVYR DLFCFDKDLM KLDENERLLS RRLPTIHHVN DSNMVISYIR
GPFLFIFNFH PSNSYQGYCV GVDEAGEYQA ILNTDEIKYG GQGFIKEEQY LQRTISRRVD
GQQNCLEVPL PSRTAQVDSN FTSPMNQFFP KVDADRYTYF HAPPISYNHV NNCPSPSPSM
VASIAAVERI LNYSFRNKRL LEEALTHPSY SDSASYQRLE FLGDAVLGLA FTNHVFLVYP
KLEPGQLSLI RAANISTEKL ARVAIKHRLF QFVRQNATGL DDKVREFAEA VSQEEDAISY
GGSIKAPKVL ADIVESLAAA VYVDINFDLI KLWEIIGGLL EPIATLEDLQ QQPQPVTVLF
EHCQKLGKHV DIKHWKKGLT NITSVYVDGE FVASGSSEQK QISKLNAVKG ALHKLSQSMS
AKIDADDGIN EPFEIEGAKQ KLHELCCKKK WERPIYQLEK DEGPPHEKKF VSSVKVPTVD
GILYITGDEK ARVKEAENSA ASFMIRALQE SNYL
//
