ID A0A1S1Q9Y4_9ACTN Unreviewed; 405 AA.
AC A0A1S1Q9Y4;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Transposase {ECO:0000313|EMBL:OHV30025.1};
GN ORFNames=CC117_27880 {ECO:0000313|EMBL:OHV30025.1};
OS Parafrankia colletiae.
OC Bacteria; Actinomycetota; Actinomycetes; Frankiales; Frankiaceae;
OC Parafrankia.
OX NCBI_TaxID=573497 {ECO:0000313|EMBL:OHV30025.1, ECO:0000313|Proteomes:UP000179627};
RN [1] {ECO:0000313|Proteomes:UP000179627}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Cc1.17 {ECO:0000313|Proteomes:UP000179627};
RA Ghodhbane-Gtari F., Swanson E., Gueddou A., Morris K., Hezbri K., Ktari A.,
RA Nouioui I., Abebe-Akele F., Simpson S., Thomas K., Gtari M., Tisa L.S.,
RA Hurst S.;
RT "Sequence Frankia sp. strain CcI1.17.";
RL Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OHV30025.1}.
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DR EMBL; MBLM01000156; OHV30025.1; -; Genomic_DNA.
DR RefSeq; WP_071089920.1; NZ_MBLM01000156.1.
DR AlphaFoldDB; A0A1S1Q9Y4; -.
DR Proteomes; UP000179627; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR InterPro; IPR021027; Transposase_put_HTH.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF12323; HTH_OrfB_IS605; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000179627};
KW Transposition {ECO:0000256|ARBA:ARBA00022578};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 8..49
FT /note="Transposase putative helix-turn-helix"
FT /evidence="ECO:0000259|Pfam:PF12323"
FT DOMAIN 188..293
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 326..394
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 405 AA; 44149 MW; 8FDEC0BDC8857BF0 CRC64;
MTQGAAVRRT FKFQLRPTVK QAAAFTAMLS SHRALYNAAL QERRDAYRHP SRTTVRYGDQ
SAQLKEIRAD DPDQARWSFS SQQATLRRLD TAMAAFFRRV KAGEKPGYPR FRGVGWFDTV
TWPKDGDGCR WDSQPDHPTQ TRVRLQGVGH VKVNQHRPVL GTVKTISVKR EGCRWYVLLS
CDDVPAAPLP VAGAVVGVDL GVVSLATTSD GRHIGNPRYL AVVAGRLARA QRKLARKKRG
SARRRKAVAR VAALHGTVRR QRLDLAHKTA LGLVREHDLI AVEALRVGNM TRRAAPRPAP
DRPGAFLPNG QAAKTGLNRS ILDAGWGVFL AVLHAKAESA GRTVVEVPPA NTSRTCAVCG
HCHADNRRTQ AVFACVACGY TAHADVNAAV NILRAGLARQ AAQAA
//
