ID A0A1S2XCZ5_CICAR Unreviewed; 240 AA.
AC A0A1S2XCZ5;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=DNA-directed RNA polymerases IV and V subunit 4 isoform X1 {ECO:0000313|RefSeq:XP_004486377.1};
GN Name=LOC101499719 {ECO:0000313|RefSeq:XP_004486377.1};
OS Cicer arietinum (Chickpea) (Garbanzo).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer.
OX NCBI_TaxID=3827 {ECO:0000313|Proteomes:UP000087171, ECO:0000313|RefSeq:XP_004486377.1};
RN [1] {ECO:0000313|RefSeq:XP_004486377.1}
RP IDENTIFICATION.
RC TISSUE=Etiolated seedlings {ECO:0000313|RefSeq:XP_004486377.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the eukaryotic RPB4 RNA polymerase subunit
CC family. {ECO:0000256|ARBA:ARBA00025724}.
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DR RefSeq; XP_004486377.1; XM_004486320.3.
DR AlphaFoldDB; A0A1S2XCZ5; -.
DR STRING; 3827.A0A1S2XCZ5; -.
DR PaxDb; 3827-XP_004486377-1; -.
DR GeneID; 101499719; -.
DR KEGG; cam:101499719; -.
DR eggNOG; KOG2351; Eukaryota.
DR OrthoDB; 1108643at2759; -.
DR Proteomes; UP000087171; Chromosome Ca1.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.20.1250.40; -; 1.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR006590; RNA_pol_Rpb4/RPC9_core.
DR InterPro; IPR045222; Rpb4-like.
DR InterPro; IPR005574; Rpb4/RPC9.
DR InterPro; IPR038324; Rpb4/RPC9_sf.
DR PANTHER; PTHR21297; DNA-DIRECTED RNA POLYMERASE II; 1.
DR PANTHER; PTHR21297:SF2; DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4; 1.
DR Pfam; PF03874; RNA_pol_Rpb4; 1.
DR SMART; SM00657; RPOL4c; 1.
DR SUPFAM; SSF47819; HRDC-like; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000313|RefSeq:XP_004486377.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000087171};
KW Transcription {ECO:0000313|RefSeq:XP_004486377.1}.
FT DOMAIN 119..240
FT /note="RNA polymerase Rpb4/RPC9 core"
FT /evidence="ECO:0000259|SMART:SM00657"
FT REGION 88..113
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 240 AA; 26215 MW; 96BF074B1DD65F55 CRC64;
MSIQNRFFFV KGKLIISILC YSVKPLISFG VHFLCFKFCR LKQVLAAMSD KGGKGGSLLS
KGSLKGKDDS ATKSAKGRKV QFSKEADFTK GGKGDKVANG GKSSASKDPH QFEHRVDQGL
PENFKCLMDC EAAVILQGIQ DHMVMLSRDP SIKIPVSFDK GLSYAKSSSK YSNHESVRRT
LEPLMDHGLT ESEISVIANV CPETADEVFA LLPSLKGKRG INSLPIEKSL SELAKLKQPM
//
