ID A0A1S3B2C2_CUCME Unreviewed; 220 AA.
AC A0A1S3B2C2;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=DNA-directed RNA polymerases IV and V subunit 4 isoform X1 {ECO:0000313|RefSeq:XP_008440955.1, ECO:0000313|RefSeq:XP_008440957.1};
GN Name=LOC103485216 {ECO:0000313|RefSeq:XP_008440955.1,
GN ECO:0000313|RefSeq:XP_008440957.1, ECO:0000313|RefSeq:XP_008440958.1,
GN ECO:0000313|RefSeq:XP_008440959.1};
GN Synonyms=103485216 {ECO:0000313|EnsemblPlants:MELO3C007997.2.1};
OS Cucumis melo (Muskmelon).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis.
OX NCBI_TaxID=3656 {ECO:0000313|Proteomes:UP000089565, ECO:0000313|RefSeq:XP_008440955.1};
RN [1] {ECO:0000313|Proteomes:UP000089565}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DHL92 {ECO:0000313|Proteomes:UP000089565};
RX PubMed=22753475; DOI=10.1073/pnas.1205415109;
RA Garcia-Mas J., Benjak A., Sanseverino W., Bourgeois M., Mir G.,
RA Gonzalez V.M., Henaff E., Camara F., Cozzuto L., Lowy E., Alioto T.,
RA Capella-Gutierrez S., Blanca J., Canizares J., Ziarsolo P.,
RA Gonzalez-Ibeas D., Rodriguez-Moreno L., Droege M., Du L.,
RA Alvarez-Tejado M., Lorente-Galdos B., Mele M., Yang L., Weng Y.,
RA Navarro A., Marques-Bonet T., Aranda M.A., Nuez F., Pico B., Gabaldon T.,
RA Roma G., Guigo R., Casacuberta J.M., Arus P., Puigdomenech P.;
RT "The genome of melon (Cucumis melo L.).";
RL Proc. Natl. Acad. Sci. U.S.A. 109:11872-11877(2012).
RN [2] {ECO:0000313|EnsemblPlants:MELO3C007997.2.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2023) to UniProtKB.
RN [3] {ECO:0000313|RefSeq:XP_008440955.1, ECO:0000313|RefSeq:XP_008440957.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the eukaryotic RPB4 RNA polymerase subunit
CC family. {ECO:0000256|ARBA:ARBA00025724}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR RefSeq; XP_008440955.1; XM_008442733.1.
DR RefSeq; XP_008440957.1; XM_008442735.2.
DR RefSeq; XP_008440958.1; XM_008442736.2.
DR RefSeq; XP_008440959.1; XM_008442737.2.
DR EnsemblPlants; MELO3C007997.2.1; MELO3C007997.2.1; MELO3C007997.2.
DR GeneID; 103485216; -.
DR Gramene; MELO3C007997.2.1; MELO3C007997.2.1; MELO3C007997.2.
DR KEGG; cmo:103485216; -.
DR eggNOG; KOG2351; Eukaryota.
DR OrthoDB; 1108643at2759; -.
DR Proteomes; UP000089565; Unplaced.
DR Proteomes; UP000596662; Unplaced.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.20.1250.40; -; 1.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR006590; RNA_pol_Rpb4/RPC9_core.
DR InterPro; IPR045222; Rpb4-like.
DR InterPro; IPR005574; Rpb4/RPC9.
DR InterPro; IPR038324; Rpb4/RPC9_sf.
DR PANTHER; PTHR21297; DNA-DIRECTED RNA POLYMERASE II; 1.
DR PANTHER; PTHR21297:SF2; DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4; 1.
DR Pfam; PF03874; RNA_pol_Rpb4; 1.
DR SMART; SM00657; RPOL4c; 1.
DR SUPFAM; SSF47819; HRDC-like; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000313|RefSeq:XP_008440955.1,
KW ECO:0000313|RefSeq:XP_008440957.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000089565};
KW Transcription {ECO:0000313|RefSeq:XP_008440955.1,
KW ECO:0000313|RefSeq:XP_008440957.1}.
FT DOMAIN 100..219
FT /note="RNA polymerase Rpb4/RPC9 core"
FT /evidence="ECO:0000259|SMART:SM00657"
FT REGION 1..80
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 27..48
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 220 AA; 23874 MW; A6FCD724AEB7C901 CRC64;
MSEKGEKGFS VQKKPAKSSL KSSALKDASL KGKDDSLSKL KKGRKVQFDA QGSVDAPNSF
SMKYSGKNGD MGKGGKGANT KASVAKEPQS LELKIEQELP KNVKCQCLMD CEAAQLLQGI
QDQMVFLSAD PTIKIPTSFD RGLQYAKRAN HYVNAESVRP VLETLKKYGI TDSEICVIAN
VCPDTTDEVF ALLPSLKNKR SKLSEPLNNV LSELAKVKSS
//
