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Database: UniProt
Entry: A0A1S3BBJ7_CUCME
LinkDB: A0A1S3BBJ7_CUCME
Original site: A0A1S3BBJ7_CUCME 
ID   A0A1S3BBJ7_CUCME        Unreviewed;      1091 AA.
AC   A0A1S3BBJ7;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   24-JAN-2024, entry version 36.
DE   SubName: Full=DNA damage-binding protein 1 {ECO:0000313|RefSeq:XP_008444949.1};
GN   Name=LOC103488135 {ECO:0000313|RefSeq:XP_008444949.1};
GN   Synonyms=103488135 {ECO:0000313|EnsemblPlants:MELO3C002793.2.1};
OS   Cucumis melo (Muskmelon).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis.
OX   NCBI_TaxID=3656 {ECO:0000313|Proteomes:UP000089565, ECO:0000313|RefSeq:XP_008444949.1};
RN   [1] {ECO:0000313|Proteomes:UP000089565}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. DHL92 {ECO:0000313|Proteomes:UP000089565};
RX   PubMed=22753475; DOI=10.1073/pnas.1205415109;
RA   Garcia-Mas J., Benjak A., Sanseverino W., Bourgeois M., Mir G.,
RA   Gonzalez V.M., Henaff E., Camara F., Cozzuto L., Lowy E., Alioto T.,
RA   Capella-Gutierrez S., Blanca J., Canizares J., Ziarsolo P.,
RA   Gonzalez-Ibeas D., Rodriguez-Moreno L., Droege M., Du L.,
RA   Alvarez-Tejado M., Lorente-Galdos B., Mele M., Yang L., Weng Y.,
RA   Navarro A., Marques-Bonet T., Aranda M.A., Nuez F., Pico B., Gabaldon T.,
RA   Roma G., Guigo R., Casacuberta J.M., Arus P., Puigdomenech P.;
RT   "The genome of melon (Cucumis melo L.).";
RL   Proc. Natl. Acad. Sci. U.S.A. 109:11872-11877(2012).
RN   [2] {ECO:0000313|EnsemblPlants:MELO3C002793.2.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2023) to UniProtKB.
RN   [3] {ECO:0000313|RefSeq:XP_008444949.1}
RP   IDENTIFICATION.
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the DDB1 family.
CC       {ECO:0000256|ARBA:ARBA00007453}.
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DR   RefSeq; XP_008444949.1; XM_008446727.2.
DR   EnsemblPlants; MELO3C002793.2.1; MELO3C002793.2.1; MELO3C002793.2.
DR   GeneID; 103488135; -.
DR   Gramene; MELO3C002793.2.1; MELO3C002793.2.1; MELO3C002793.2.
DR   KEGG; cmo:103488135; -.
DR   eggNOG; KOG1897; Eukaryota.
DR   InParanoid; A0A1S3BBJ7; -.
DR   OrthoDB; 226997at2759; -.
DR   Proteomes; UP000089565; Unplaced.
DR   Proteomes; UP000596662; Unplaced.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   Gene3D; 1.10.150.910; -; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   PANTHER; PTHR10644:SF3; DNA DAMAGE-BINDING PROTEIN 1; 1.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000089565}.
FT   DOMAIN          76..537
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          748..1060
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
SQ   SEQUENCE   1091 AA;  121746 MW;  4533709DD354A4C9 CRC64;
     MSVWNYVVTA HKPTNVTHSC VGNFTGPQEL NLIIAKCTRI EIHLLTAQGL QPMLDVPIYG
     RIATLELFRP HGEAQDFLFI ATERYKFCVL QWDTESSELI TRAMGDVSDR IGRPTDSGQI
     GIIDPDCRLI GLHLYDGLFK VIPFDNKGQL KEAFNIRLEE LQVLDIKFLY GCSRPTIVVL
     YQDNKDARHV KTYEVVLKDK DFVEGPWSQN NLDNGAAVLI PVPPPLCGVI IIGEETIVYC
     SATAFKAIPV RPSITRAYGR VDADGSRYLL GDHAGLLHLL VITHEKERVT GLKIELLGET
     SIASTISYLD NAFVYIGSSY GDSQLVKLNV QPDAKGSYVE VLERYVNLGP IVDFCVVDLE
     RQGQGQVVTC SGAYKDGSLR VVRNGIGINE QASVELQGIK GMWSLRSSTD DPFDTFLVVS
     FISETRILAM NLEDELEETE IEGFNSQVQT LFCHDALFNQ LVQVTSSSVR LVSSTTRELL
     NEWNAPSNYS INVATANASQ VLLATGGGVL VHLEICDGLL VEKKHIQLEH EISCLDINPI
     GDNPNCSQLA AVGMWTDISV RIFSLPDLNL LTKEQLGGEI IPRSVLLCTF EGISYLLCAL
     GDGHLLNFIL NTNSNSCELM DRKKVSLGTQ PITLRTFSSK NATHVFAASD RPTVIYSSNK
     KLLYSNVNLK EVSHMCPFNS AAFPDSLAIA KEGELTIGTI DDIQKLHIRS IPLGEHARRI
     CHQEQSRTFA ICSLRYNQSG TEDTEMHFIR LLDDQTFESI STYALDTYEY GCSILSCSFS
     DDNNVYYCVG TAYVMPEENE PTKGRILVFV VEEGKLQLIA EKETKGSVYS LNAFNGKLLA
     AINQKIQLYK WTLRDDGTRE LQSECGHHGH ILALYVQTRG DFIVVGDLMK SISLLIYKHE
     EGAIEERARD YNANWMSAVE ILDDDIYLGA ENYFNLFTVR KNSEGATDEE RSRLEVVGEY
     HLGEFVNRFQ HGSLVMRLPD SDVGQIPTVI FGSVNGVIGV IASLPHDQYV FLERLQSNLR
     KVIKGVGGLS HEQWRSFNNE KRTAEAKNFL DGDLIESFLD LNRTKMEEIS RAMGVSAEEL
     CKRVEELTRL H
//
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