ID A0A1S3FW22_DIPOR Unreviewed; 829 AA.
AC A0A1S3FW22;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=DNA polymerase kappa {ECO:0000256|ARBA:ARBA00016178};
GN Name=Polk {ECO:0000313|RefSeq:XP_012880758.1};
OS Dipodomys ordii (Ord's kangaroo rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae;
OC Dipodomyinae; Dipodomys.
OX NCBI_TaxID=10020 {ECO:0000313|Proteomes:UP000081671, ECO:0000313|RefSeq:XP_012880758.1};
RN [1] {ECO:0000313|RefSeq:XP_012880758.1}
RP IDENTIFICATION.
RC TISSUE=Kidney {ECO:0000313|RefSeq:XP_012880758.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_012880758.1; XM_013025304.1.
DR AlphaFoldDB; A0A1S3FW22; -.
DR GeneID; 105992438; -.
DR CTD; 51426; -.
DR OrthoDB; 146204at2759; -.
DR Proteomes; UP000081671; Unplaced.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd03586; PolY_Pol_IV_kappa; 1.
DR Gene3D; 1.10.150.810; -; 2.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.40.1170.60; -; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 2.
DR Gene3D; 3.30.1490.100; DNA polymerase, Y-family, little finger domain; 1.
DR HAMAP; MF_01113; DNApol_IV; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR036775; DNA_pol_Y-fam_lit_finger_sf.
DR InterPro; IPR017961; DNA_pol_Y-fam_little_finger.
DR InterPro; IPR022880; DNApol_IV.
DR InterPro; IPR024728; PolY_HhH_motif.
DR InterPro; IPR006642; Rad18_UBZ4.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001126; UmuC.
DR PANTHER; PTHR11076:SF33; DNA POLYMERASE KAPPA; 1.
DR PANTHER; PTHR11076; DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; 1.
DR Pfam; PF00817; IMS; 1.
DR Pfam; PF11799; IMS_C; 1.
DR Pfam; PF11798; IMS_HHH; 1.
DR PIRSF; PIRSF036603; DPol_eta; 2.
DR SMART; SM00734; ZnF_Rad18; 2.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF100879; Lesion bypass DNA polymerase (Y-family), little finger domain; 1.
DR PROSITE; PS50173; UMUC; 1.
DR PROSITE; PS51908; ZF_UBZ4; 2.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763, ECO:0000256|PROSITE-
KW ProRule:PRU01256};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204, ECO:0000256|PROSITE-
KW ProRule:PRU01256}; DNA synthesis {ECO:0000256|ARBA:ARBA00022634};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000081671};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU01256}.
FT DOMAIN 103..335
FT /note="UmuC"
FT /evidence="ECO:0000259|PROSITE:PS50173"
FT DOMAIN 594..624
FT /note="UBZ4-type"
FT /evidence="ECO:0000259|PROSITE:PS51908"
FT DOMAIN 735..765
FT /note="UBZ4-type"
FT /evidence="ECO:0000259|PROSITE:PS51908"
FT REGION 772..829
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 57..99
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 772..794
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 829 AA; 94192 MW; A241766EA660F070 CRC64;
MDSTKEKSDS YKDDLLLRMG LNDNKAGMEG LDKEKINKII MEATKGSRFY GNELKKEKQV
NQRIDNMMQQ KAQITNQQLR KAQLQVDRFA LELEQSRNLN NTIVHIDMDA FYAAVEMRDN
PELKDKPIAV GSLSMLSTSN YHARRFGVRA AMPGFIAKRL CPQLIIVPPN FDKYKAVSKE
VKEILAEYDP NFMAMSLDEA YLNITKHLQE RQNWPEDKRR YFLKMGNLVE NDSPPDLQPP
GNPFQVNFEE QNNPQTLQDS IVFGTSAEEV VKEIRFRIEQ KTTLTASAGI APNTMLAKVC
SDKNKPNGQY QILPTRQAVM DFIKDLPIRK VSGIGKVTEK MLKALGIITC TELYQQRALL
SVLFSETSWH YFLHISLGLG STDLARDGER KSMSVERTFS EVSKAEEQYS LCQELCTELA
QDLQKEGLKG RTVTIKLKNV NFEVKTRAIT VSSIVSTAEE IFAIAKELLR TEINAECPYP
LRLRLMGVRI SSFSSEEDKK HQQRSIIGFL QPGNQALLAT ACELDKTDKD QFAKPLEMCH
KKSFFDKKRS ERMWNHQQKS KCETVDRQSS QLSQPFQVLK KMIENVETSE NCQVFTCPIC
FKEQGHISLE AFNKHMDACL DGHSSSENSK MFSYPHASST AMNQKESIPH SFSLCEKQNY
ETHEKNLEMT SVHCVDSVET KSNSPKAENS DISRVKFSKK ECPNLPNKSP ITISLENGSG
QESLQSSISE MTSQALVCPV CNLEQKTSDL TQFNEHVDIC LNKDIIQELR NNEFKPVNQP
KESSRSSGTS SKVQKTEAKT KRPGLMTKYS ASKKTKPNNP RHTLDVFFK
//