ID A0A1S3GF03_DIPOR Unreviewed; 825 AA.
AC A0A1S3GF03;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=Exosome component 10 {ECO:0000313|RefSeq:XP_012887285.1};
GN Name=Exosc10 {ECO:0000313|RefSeq:XP_012887285.1};
OS Dipodomys ordii (Ord's kangaroo rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae;
OC Dipodomyinae; Dipodomys.
OX NCBI_TaxID=10020 {ECO:0000313|Proteomes:UP000081671, ECO:0000313|RefSeq:XP_012887285.1};
RN [1] {ECO:0000313|RefSeq:XP_012887285.1}
RP IDENTIFICATION.
RC TISSUE=Kidney {ECO:0000313|RefSeq:XP_012887285.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
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DR RefSeq; XP_012887285.1; XM_013031831.1.
DR AlphaFoldDB; A0A1S3GF03; -.
DR STRING; 10020.ENSDORP00000003520; -.
DR GeneID; 105997401; -.
DR KEGG; dord:105997401; -.
DR CTD; 5394; -.
DR InParanoid; A0A1S3GF03; -.
DR OrthoDB; 2880475at2759; -.
DR Proteomes; UP000081671; Unplaced.
DR GO; GO:0000176; C:nuclear exosome (RNase complex); IEA:InterPro.
DR GO; GO:0000175; F:3'-5'-RNA exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:InterPro.
DR CDD; cd06147; Rrp6p_like_exo; 1.
DR Gene3D; 1.10.150.80; HRDC domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR012588; Exosome-assoc_fac_Rrp6_N.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR002121; HRDC_dom.
DR InterPro; IPR044876; HRDC_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR045092; Rrp6-like.
DR PANTHER; PTHR12124:SF47; EXOSOME COMPONENT 10; 1.
DR PANTHER; PTHR12124; POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR Pfam; PF00570; HRDC; 1.
DR Pfam; PF08066; PMC2NT; 1.
DR SMART; SM00474; 35EXOc; 1.
DR SMART; SM00341; HRDC; 1.
DR SUPFAM; SSF47819; HRDC-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50967; HRDC; 1.
PE 4: Predicted;
KW Exosome {ECO:0000256|ARBA:ARBA00022835};
KW Reference proteome {ECO:0000313|Proteomes:UP000081671};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT DOMAIN 503..583
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 210..232
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 713..825
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 215..232
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 714..745
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 825 AA; 94111 MW; 0ABAF68F5E40341D CRC64;
MAPPSPRDPQ ASSATSATDS DGEMVLPGFP DADSFVKFAL SSVVAVTKAS GGLPQFGDEY
DFYRSFPGFQ AFCETQGDRL LQCMSRVMQY HGCRSNIKDQ SKVTELEDKF DLLVDTNDVI
LERVGILLDE ASGVNKHQQP VLPAGLQVPK TIVSSWNRKA GEYGKKTKSE TFRLLHAKNI
IRPQLKFREK IDNSNTPFLP KIFIKPNAQK PLPQALSKER RERPQDRPED LDVPPALADF
IHQQRTQQVE QDMFAHPYQY ELDHFTPPDS VLQKPEPQLY RPVEETPCCF VSSLDQLVEL
NEKLLNCQEF AVDLEHHSYR SFLGLTCLMQ ISTRTEDFII DTLELRSDMY ILNESLTDPA
IVKVFHGADS DIEWLQKDFG LYVVNMFDTH QAARLLNLGR HSLDHLLRLY CGVEANKQYQ
LADWRIRPLP EEMLNYARDD THYLLYIYDK MRLELWERGN DQPTQLQMVW QRSRDLCLKK
FVKPLFTDES YLELYRKQKK HLNSQQLAAF QLLFSWRDKT ARREDESYGY VLPNHMMLKI
AEELPKEPQG IIACCNPVPP LVRQQINEMH LLVQQAREMP LLKSEAAAGK KKSGALPSAE
RLENVLFGPH DCSHAPPENY LVPPCGGSGP AQKQASLFAE ETLLDTKCLL ATAVISLFSI
SNRWKLAKQA QVRKEYKDTA KKKAAEQTVA QEQVKEEYKA TAEQAISVRQ QTVLENAKKR
ERTTGDTRTT EQRQEKKRLK TAKKLKGPDP APSTFTPYDY SQSDFKAFAG DSKCKPSSQF
DPNKPAGSGK KCIAAKKVKQ SMGNKSMSFP TGKSDRGFRY NWPKR
//