ID A0A1S3LBH6_SALSA Unreviewed; 864 AA.
AC A0A1S3LBH6;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=RNA-binding protein 5-like isoform X1 {ECO:0000313|RefSeq:XP_013988313.1};
GN Name=LOC106565569 {ECO:0000313|RefSeq:XP_013988313.1};
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030 {ECO:0000313|Proteomes:UP000087266, ECO:0000313|RefSeq:XP_013988313.1};
RN [1] {ECO:0000313|RefSeq:XP_013988313.1}
RP IDENTIFICATION.
RC TISSUE=Muscle {ECO:0000313|RefSeq:XP_013988313.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR RefSeq; XP_013988313.1; XM_014132838.1.
DR AlphaFoldDB; A0A1S3LBH6; -.
DR STRING; 8030.ENSSSAP00000119099; -.
DR PaxDb; 8030-ENSSSAP00000119099; -.
DR Ensembl; ENSSSAT00000154389; ENSSSAP00000119099; ENSSSAG00000081034.
DR GeneID; 106565569; -.
DR KEGG; sasa:106565569; -.
DR OMA; CAGPTAN; -.
DR OrthoDB; 298711at2759; -.
DR Proteomes; UP000087266; Chromosome ssa12.
DR Bgee; ENSSSAG00000081034; Expressed in actinopterygian pyloric caecum and 15 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12755; RRM2_RBM5; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR Gene3D; 4.10.1060.10; Zinc finger, RanBP2-type; 1.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR041591; OCRE.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR034993; RBM5_RRM2.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR001876; Znf_RanBP2.
DR InterPro; IPR036443; Znf_RanBP2_sf.
DR PANTHER; PTHR13948; RNA-BINDING PROTEIN; 1.
DR PANTHER; PTHR13948:SF21; RNA-BINDING PROTEIN 5; 1.
DR Pfam; PF01585; G-patch; 1.
DR Pfam; PF17780; OCRE; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF00641; zf-RanBP; 1.
DR SMART; SM00443; G_patch; 1.
DR SMART; SM00360; RRM; 2.
DR SMART; SM00547; ZnF_RBZ; 1.
DR SUPFAM; SSF90209; Ran binding protein zinc finger-like; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50174; G_PATCH; 1.
DR PROSITE; PS50102; RRM; 2.
DR PROSITE; PS01358; ZF_RANBP2_1; 1.
DR PROSITE; PS50199; ZF_RANBP2_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022728};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00022728};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000087266};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}; Spliceosome {ECO:0000256|ARBA:ARBA00022728};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00322};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00322}.
FT DOMAIN 98..178
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 181..210
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 233..317
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 792..838
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT REGION 1..84
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 540..579
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 591..615
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 662..687
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 758..788
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 722..756
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 540..560
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 561..579
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 864 AA; 95596 MW; DB7ADF5FE9C3FBDD CRC64;
MGADKRFGRS ERSGRYASDR GRDDPEWHER RDREPDRDYD QRWSDERHTD RFDERRDRDG
PERRRKRHNS DRSEDGYQSD GDYQEQDYKM ELGQEESKTI MLRGLSLYVT EEAIQAALEQ
LQGPQPVDIR LMKKRTGISR GFAFVEFYHL QDATRWMETN QNKLMIQGKC VAMHYSNRRH
TFENWLCNAC GLYNFRKRLR CFRCGAVKVE GSESAGPSDR NLEPKQAGDY CGDTIILRNI
APLSTVEAIM TTLAPYAILS PGNIRLIKDK QTGQNRGFAF VQLSSPLEAS QLLTILQGLQ
PPLKLDGKTI GVDYAKSARK DLLMPDGNRV SAFSVASTAI AAAQWSSSQP KQALGATTDY
GSLQEGCAPH TQYGQDYLSW PQQPAVLDPA PGDGILGAAP GVKALVPTAA GVVVSLTTQV
YQHHLLSQPT IQAHQLVGQI DVAPQATSSR VATSSLRTAA AALAASPGAV TFSDSTSVVP
DTSAYQYDES SGYYYDPQTG LYYDPNSQYY FNSQTQQYLY WDSETQTYIP AAAAETTAVE
TTAADSSSEQ ASASSAASSS TESKEKKDKP KSKSAQQIAK DMERWAKSLN KQKESIKSSL
QGLGQGRDED RREAAAADAG FSTLFEKKHG AGFETQPLVM NELLKNGEPE TPVAKSGLVA
AYIGGDSDSE DAANPESGGG GDEGSDKLTD WKKMACLLCL RQFPGRDALL RHQQLSDLHK
QNLEIHRRSK LSEAQLEELE RKEMELKYRD RAAERRDKYG VPEPPAPKKK KFYQPPAPTV
NYEQPTKDGL TSDNIGNKML QAMGWQEGKG LGRNQQGITA PISASLRTKG TGLGIKGSNY
ELSASDTYKD AVRKAMFARF TEIE
//
