ID A0A1S3LTP1_SALSA Unreviewed; 881 AA.
AC A0A1S3LTP1;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Superkiller viralicidic activity 2-like 2 isoform X2 {ECO:0000313|RefSeq:XP_013994195.1};
GN Name=LOC106568406 {ECO:0000313|RefSeq:XP_013994195.1};
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030 {ECO:0000313|Proteomes:UP000087266, ECO:0000313|RefSeq:XP_013994195.1};
RN [1] {ECO:0000313|RefSeq:XP_013994195.1}
RP IDENTIFICATION.
RC TISSUE=Muscle {ECO:0000313|RefSeq:XP_013994195.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
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DR RefSeq; XP_013994195.1; XM_014138720.1.
DR AlphaFoldDB; A0A1S3LTP1; -.
DR OrthoDB; 1352at2759; -.
DR Proteomes; UP000087266; Chromosome ssa13.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR CDD; cd18024; DEXHc_Mtr4-like; 1.
DR CDD; cd13154; KOW_Mtr4; 1.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 2.
DR Gene3D; 2.40.30.300; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR025696; MTR4_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF7; EXOSOME RNA HELICASE MTR4; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000087266}.
FT DOMAIN 136..292
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 399..571
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..62
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 341..362
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..62
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 881 AA; 99064 MW; 38A6C480D390A59A CRC64;
MADAFGDDLF SVFDEEQTSS TKKKPPIPEK GKATSNNDER GKNEPPAAKT KREADNDETD
EVVFGKKAKL ETVSTEEINL ADCMPKVKVE PVETVEGCNH EVALPANEEY TQLKPRVGKA
AKEYPFILDP FQREAILCID NNQSVLVSAH TSAGKTVCAE YAIALALRGK QRVIFTSPIK
ALSNQKYREM YEEFQDVGLM TGDVTINPTA SCLVMTTEIL RSMLYRGSEV MREVAWVIFD
EIHYMRDAER GVVWEETIIL LPDNVHYVFL SATIPNAKQF AEWICHLHKQ PCHVVYTDFR
PTPLQHYIFP AGGDGLHLVV DENGEFREDN FNTAMQVLRD TGDSGGSSGG GKWDTKGRKG
GTRGPSNVFK IVKMIMEKNF QPVIIFSFSK KECEAYALQV SKLDFNTDEE KQLVEEVFNN
AVDCLSDDDK KLPQVENVLP LLKRGIGIHH GGLLPILKET IEILFSEGLI KALFATETFA
MGINMPARTV LFTSARKFDG KDFRWITSGE YIQMSGRAGR RGMDERGIVI FMVDEKMSPA
VGKQLLKGSA DPLNSAFHLT YNMVLNLLRV EEINPEYMLE KSFYQFQHYR AVPGVVEKMG
KLETMYNAIE IPNEESVVTY YKIRQQLAKL GKEIEEFVHK PKYCLPFLQP GRLVKVKNED
VDFGWGVVVN FSKKSNVKAS TGDADPLYVV EVLVHCSQES VKNAATEAAK PAATGEKGEM
QVVPVMLRLL TSISSVRLYI PKDLWPYDNR QSMLKSIQEV QKRFPDGVPL LDPIDDMGIK
DPGLKKIIQK VEAFEHRMYS HPMHSDPSLE AVYSLCEKKA LIAGDIKGAK RELKKARTVL
QMDELKCRKR VLRRLGFATS SDVIEMKGRV ACEISSADEL L
//