ID A0A1S3NRT2_SALSA Unreviewed; 1076 AA.
AC A0A1S3NRT2;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Semaphorin-6D-like isoform X4 {ECO:0000313|RefSeq:XP_014018127.1};
GN Name=LOC106580978 {ECO:0000313|RefSeq:XP_014018127.1};
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030 {ECO:0000313|Proteomes:UP000087266, ECO:0000313|RefSeq:XP_014018127.1};
RN [1] {ECO:0000313|RefSeq:XP_014018127.1}
RP IDENTIFICATION.
RC TISSUE=Muscle {ECO:0000313|RefSeq:XP_014018127.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00352}.
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DR RefSeq; XP_014018127.1; XM_014162652.1.
DR AlphaFoldDB; A0A1S3NRT2; -.
DR GeneID; 106580978; -.
DR OrthoDB; 5399685at2759; -.
DR Proteomes; UP000087266; Chromosome ssa02.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0030215; F:semaphorin receptor binding; IEA:InterPro.
DR GO; GO:0048468; P:cell development; IEA:UniProt.
DR GO; GO:0022008; P:neurogenesis; IEA:UniProt.
DR CDD; cd11242; Sema_6; 1.
DR Gene3D; 3.30.1680.10; ligand-binding face of the semaphorins, domain 2; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR002165; Plexin_repeat.
DR InterPro; IPR001627; Semap_dom.
DR InterPro; IPR036352; Semap_dom_sf.
DR InterPro; IPR027231; Semaphorin.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR PANTHER; PTHR11036; SEMAPHORIN; 1.
DR PANTHER; PTHR11036:SF11; SEMAPHORIN-6C; 1.
DR Pfam; PF01437; PSI; 1.
DR Pfam; PF01403; Sema; 1.
DR SMART; SM00630; Sema; 1.
DR SUPFAM; SSF103575; Plexin repeat; 1.
DR SUPFAM; SSF101912; Sema domain; 1.
DR PROSITE; PS51004; SEMA; 1.
PE 4: Predicted;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000087266};
KW Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..32
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 33..1076
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5010335560"
FT TRANSMEM 638..664
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 38..548
FT /note="Sema"
FT /evidence="ECO:0000259|PROSITE:PS51004"
FT REGION 723..744
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 786..808
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 916..958
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 918..932
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 935..958
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1076 AA; 119349 MW; 8145BBC3A23699E5 CRC64;
MRLVPGSPQP LPLLAVGLAL ALTALLPHLA MGVTPFPQDL EPISIVGREH SYLYPSFQGL
MSDNDTVRLG LDFQRMLRIN HMLYIAARDH VFAISLSASS EQIVPQQKLT WKTKDVDKCT
VRGKNSNQSL AQAASASQSS SETIEISTGI MDECYNYIKV LVPRNDETLF ACGTNAFNPT
CRNYKMSTLE QDGEEVVGQA RCPFESRQSN VGLFAGGDFY SATMTDFLAS DAVIYRSLGE
SSPVLRTVKY DSKWLREPHF LHAIEYGNYV YFFFSEIAVE YTTLGKVVFS RVARVCKNDN
GGSPRVLERY WTSFLKTRLN CSVPGDSFFY FDVLQSLTNV LQINHRPAVL GVFTTQANSI
TGSAVCAFYM DDIEKAFNGK FKEQRNSEST WTPVPEEQVP KPRPGCCAGD GSAAAYKSST
TFPDDTLTFI KNHPLMDEAV PSVNHRPYFT RTTSRFKLTQ LAVDTSAGPY KNHTVLFLGS
EDGRVLKILA STHLNASFST QLLEDIDVYN PTKCNVRGED RRVLGLELDR EHHALFVAFS
SCVVRVPLSR CSDYGSCKES CLSSRDPYCV WQRTGSCATV VPGFRGGFEQ DVENGYPHYP
DSCHDVLATT RKQNTLADSA YGVRRPPEME KTNHSVHYTL LIACVLVAFV LGAFLSGFLV
SCYCNHTGNK TKRLAKDPEA PIPHALSLRS LAKLNGLLDS QNKEDKMEVS SPKLYNSFFQ
NGKEHRQGAP RRNGGHHPGM TMGDLVHPHH LHHSSELSGL PTPDSTPELP IKNMKAFKNQ
WEKNQNCNNA KEPKSHNMGQ GSRPSSGLLH QQIYPYSHSF SNGQALANGH ALVGGPQHLE
ERKIHNTERM LVQQPYPCYP QKVMEVTSLD ELLKHIHEAN SSKNTQVMTS SGLSASGGCH
GGQLAFANRV QPHIPETESA PYYSSSTLPR DSLTRRMDVP PDMPPHHQST LERRHSSQRH
SLITAATKIA NGGGGGGMVH RQQSFSQRNG HQHQPPPMLA RMNSTGSACE IHYPLIPNGY
LTRQQSYNGE QQEDTGGYLH RGAIVRRTTS LKPDVPPKPL FIPASSPVNQ QGNFNY
//