GenomeNet

Database: UniProt
Entry: A0A1S3PC33_SALSA
LinkDB: A0A1S3PC33_SALSA
Original site: A0A1S3PC33_SALSA 
ID   A0A1S3PC33_SALSA        Unreviewed;       471 AA.
AC   A0A1S3PC33;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   24-JAN-2024, entry version 34.
DE   SubName: Full=Nuclear receptor ROR-beta-like {ECO:0000313|RefSeq:XP_014025131.1};
GN   Name=LOC106584392 {ECO:0000313|RefSeq:XP_014025131.1};
OS   Salmo salar (Atlantic salmon).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC   Salmonidae; Salmoninae; Salmo.
OX   NCBI_TaxID=8030 {ECO:0000313|Proteomes:UP000087266, ECO:0000313|RefSeq:XP_014025131.1};
RN   [1] {ECO:0000313|RefSeq:XP_014025131.1}
RP   IDENTIFICATION.
RC   TISSUE=Muscle {ECO:0000313|RefSeq:XP_014025131.1};
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU004334}.
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
CC       {ECO:0000256|RuleBase:RU004334}.
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DR   RefSeq; XP_014025131.1; XM_014169656.1.
DR   AlphaFoldDB; A0A1S3PC33; -.
DR   STRING; 8030.ENSSSAP00000097859; -.
DR   PaxDb; 8030-ENSSSAP00000097859; -.
DR   GeneID; 106584392; -.
DR   KEGG; sasa:106584392; -.
DR   OrthoDB; 3475284at2759; -.
DR   Proteomes; UP000087266; Chromosome ssa23.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0004879; F:nuclear receptor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   CDD; cd06968; NR_DBD_ROR; 1.
DR   Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR   Gene3D; 1.10.565.10; Retinoid X Receptor; 1.
DR   InterPro; IPR035500; NHR-like_dom_sf.
DR   InterPro; IPR044101; NR_DBD_ROR.
DR   InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd.
DR   InterPro; IPR001723; Nuclear_hrmn_rcpt.
DR   InterPro; IPR003079; ROR_rcpt.
DR   InterPro; IPR001628; Znf_hrmn_rcpt.
DR   InterPro; IPR013088; Znf_NHR/GATA.
DR   PANTHER; PTHR45805; NUCLEAR HORMONE RECEPTOR HR3-RELATED; 1.
DR   PANTHER; PTHR45805:SF9; RAR-RELATED ORPHAN RECEPTOR C A; 1.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   PRINTS; PR01293; RORNUCRECPTR.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR   SUPFAM; SSF48508; Nuclear receptor ligand-binding domain; 1.
DR   PROSITE; PS51843; NR_LBD; 1.
DR   PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR   PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
PE   3: Inferred from homology;
KW   Developmental protein {ECO:0000256|ARBA:ARBA00022473};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU004334};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW   ECO:0000256|RuleBase:RU004334};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU004334};
KW   Receptor {ECO:0000256|ARBA:ARBA00023170, ECO:0000256|RuleBase:RU004334};
KW   Reference proteome {ECO:0000313|Proteomes:UP000087266};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163,
KW   ECO:0000256|RuleBase:RU004334};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW   ECO:0000256|RuleBase:RU004334};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|RuleBase:RU004334};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|RuleBase:RU004334}.
FT   DOMAIN          7..82
FT                   /note="Nuclear receptor"
FT                   /evidence="ECO:0000259|PROSITE:PS51030"
FT   DOMAIN          221..459
FT                   /note="NR LBD"
FT                   /evidence="ECO:0000259|PROSITE:PS51843"
FT   REGION          99..123
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          161..187
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        165..184
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   471 AA;  52894 MW;  3E9BCD42BA22AD7E CRC64;
     MRAQIEVIPC KICGDKSSGI HYGVITCEGC KGFFRRSQQN NAIYSCSRQR NCLIDRTNRN
     RCQHCRLQKC LALGMSRDAV KFGRMSKKQR DSLYAEVQKH QASQELTAAH EEGGEVGGHS
     RAYSRGSSAA LSDLDDITLP DGLLCDLPLT PEGAEREYCN LEMMGGSGGS SSSSQSSPEQ
     NGLDFGDSNH HIKHEYQLLH ESGLFTHALL NPLPEGFSML EIERITASVV KSHIETSQHG
     SEELKRLVWS LYTPEETRSF QSKSAEVMWQ QCAIHLTNAI QYVVEFAKRI TGFLDLCQND
     QVILLKAGCL DVLLIRMCRA YNPINNTILF DSKFASAQTF KALGCDDLVG AVFDLAKSLS
     RMQLSEEEMA LFSASVLLSP DRPWLTDRQQ VQKLQEKVYL ALQHCLHRGG SSEEKLAKMV
     SKLPMMKSIC NLHIDKLEFF RLLHPETAYN FPPLYREVFS SEITFPDSTM D
//
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