ID A0A1S3PT58_SALSA Unreviewed; 1976 AA.
AC A0A1S3PT58;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=Trinucleotide repeat-containing gene 6C protein-like isoform X3 {ECO:0000313|RefSeq:XP_014030831.1};
GN Name=LOC106587198 {ECO:0000313|RefSeq:XP_014030831.1};
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030 {ECO:0000313|Proteomes:UP000087266, ECO:0000313|RefSeq:XP_014030831.1};
RN [1] {ECO:0000313|RefSeq:XP_014030831.1}
RP IDENTIFICATION.
RC TISSUE=Muscle {ECO:0000313|RefSeq:XP_014030831.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_014030831.1; XM_014175356.1.
DR GeneID; 106587198; -.
DR OrthoDB; 5407035at2759; -.
DR Proteomes; UP000087266; Chromosome ssa02.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR CDD; cd12713; RRM_TNRC6C; 1.
DR CDD; cd14283; UBA_TNR6C; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 1.
DR InterPro; IPR026805; GW182_M_dom.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR041917; TNR6C_UBA.
DR InterPro; IPR032226; TNRC6_PABC-bd.
DR InterPro; IPR034927; TNRC6C_RRM.
DR InterPro; IPR015940; UBA.
DR InterPro; IPR009060; UBA-like_sf.
DR PANTHER; PTHR13020; TRINUCLEOTIDE REPEAT-CONTAINING GENE 6; 1.
DR PANTHER; PTHR13020:SF9; TRINUCLEOTIDE REPEAT-CONTAINING GENE 6C PROTEIN; 1.
DR Pfam; PF12938; M_domain; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF16608; TNRC6-PABC_bdg; 2.
DR Pfam; PF00627; UBA; 1.
DR SMART; SM00165; UBA; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF46934; UBA-like; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50030; UBA; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000087266};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT DOMAIN 1207..1252
FT /note="UBA"
FT /evidence="ECO:0000259|PROSITE:PS50030"
FT DOMAIN 1795..1867
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..236
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 255..1209
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1266..1310
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1344..1378
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1485..1581
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1616..1648
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1668..1692
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1705..1766
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1880..1924
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1425..1483
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 1..21
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 40..74
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 75..98
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 121..151
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 174..190
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 197..236
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 302..324
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 343..402
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 414..454
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 498..525
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 571..589
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 597..629
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 667..691
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 698..741
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 892..906
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 915..929
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 966..1023
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1024..1038
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1040..1057
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1177..1193
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1344..1363
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1518..1543
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1558..1581
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1616..1630
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1672..1692
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1710..1732
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1880..1902
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1976 AA; 205346 MW; 12EF9277E6900571 CRC64;
MEENTNKKQE KTKKEAAQKQ AADLKTKVPE PAKPSPSPLH HPTTCVTLPQ ASHPPSSSSS
VRTNGKRAPP STQQTPQQQT PPQPPSSSSG PRYPPREVPP RFRQQEHKQL LKRGQPLPAG
ALSSLTVTPA SNPLTPGAPA SSSSSAGKRH TDLPFQSGPG AQYENPHWGA LPPATDRSST
TSSSWDQVII DGSDTEAWPS ISRSSDSRPA NPSECATAAD YTNPETSSNM SMAAGATSQQ
AHYPSLKANV TNVASMMQPG GGQGVGAIGS RGWGSGSGPI TMAPTEGAKP DGLGPNMGRS
GRAPGWNSQS SFSLNLNPNA NPSAWPVLGQ EGAGDGPNPA SLPPNGSLGN GSLGGDENNS
SSTWGGMMSP DAPSSNKNVS FSSMEHSNLN TEGQNSHHTK QPLSPIHGLP GWGGQSPTES
SQLNGDAGSS VWGNGDTKTS ADSSSKNSGW DSAPSGGMSG WGHSGSGGGA SGGGEGGWGG
DWGKPSSGEA KGGWDSSDGP AQDQQVSSWG QPIPAPTSEG SGSGGSEGRS HRRDRTGSED
GGPPPLPRQD LDPRVLCNTG WGQTPVRQHT SWEMEEQRAA NERKTSEMRG GGGGDTWRGS
SPSSGSPPDP RNGGANPNLG PSQRPGSGGS GGKSEGPSGW GGPPPSGWGE QPVNKAPNGS
VSGWGEPMAQ GHNTTNNGPK SGVQSWGVPE GKSSPTWDDG PAKTQQNQSQ SWGEGPKSSH
GWGSGHGSGS RGSNGSNGSN GGEWREPAEV KKNGSSSHMW EGEGGNGREG GGWKDSTRGG
GGNGGGWASK PASAVGGGGW GETQHPNSPA PGWGSKPQES PNGPAPGWGS KPQESPNGPA
PGWGSKPQES PNGPAPGWGS KPQESPNGPA PGWGSKPQES PNGPAPGWGS KPQESPNGNS
GGVGTGGGSM GSWGGPASVR QSSNPGWGPG SSVAKPDPAM EPTGWEEPSP PSIRRKMEID
DGTSTWGDPS AYNKTVNMWD RNNPTGGNGN QGNNPTQPPT SKSNGGMAVN SHNHSSVPPS
NNNHHHMNHH HPHHGQPPPH SQHHGNNNGS PNTAAPHQGG GPQGRPPMAN PGWGELPSVQ
QPKPEPAWGE PAGPSPAVDN GTSAWGKPPG VPGGWGDGGH GGHEPNGPYR RGNNGPSGPA
PCKPAPKSMQ DGWGGGREEE MGMSSGQWDA DAGDMWNSPA SQESSSSCNS WGQPPKKGPP
KGKMGNQPDE AWIMNRLIKQ LTDMGFPRDP AEEALKSNNM NLDQAMSALL EKKTELDKRG
MGMSDYNNGM NKPLGCRPQA LSKDPSSDRS PFLDKDGGLS DDAPPSPFLP SPVSLKLPLV
NNLQPGLALG SPGLNMQNLN NRQMQSGMLG SSGAALSRAM QQQPPQPSVP PLGSSQPSLR
AQVPQFLTPQ VQAQLLQFAA KNIGLNPALL TSPINPQQMT LLYQLQQLQM AYQRLQIQQQ
MMQAQRNVSG PIRQQEQQVA RTINNMQQQI QQHQRQLYQA LLMKQQPPGS HSGLHPGQGK
SALDSFPGHP QAPGLSDLHT KEPQSSPNSY SPYPLSGLNP NMNVNCMEVG GLSMKEPPQP
QSRLSQWTHP NSMDSLSGNS SHMEANLNKH GAISAASNLG PPGKPPHMDD SYSPYSMMGG
SESPTSPLVP PDSWGQGPGK SPKDQITNGT NINWPPEFCP GVPWKGLQNI DPENDPNMTP
GSVPSGPTIN TNIQDVNRYL LRDRSGGKLS DMKSTWSPGP ISHPSQASLS HELWKVPQGP
RNNTAPSRPP PGLTNPAKPS STWGGNSLGL AQGWSSSYTS EGTTWSTDSS NRTSSWLVLR
NLTPQIDGST LRTLCMQHGP LITFHLFLTQ GNAVVRYSSK EEAAKAQKSL HMCVLGNTTI
LAEFAGEEEV NRYFAQGQQQ LPPTTSWQPN PGTNQTRMGG GGGSQQHAIG HHWSSGGGGL
GGGAKTGGGG DLLWGGVPQY SSLWGPPSGD DSRGVIGSPN PINTLLPGDL LSGESM
//
