UniProt: A0A1S3RG42

Database: UniProt
Entry: A0A1S3RG42_SALSA

LinkDB:  A0A1S3RG42_SALSA 
Original site:  A0A1S3RG42_SALSA

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Ontology (4)   
   GO (4)   
Gene (5)   
   KEGG GENES (1)   
   NCBI-Gene (1)   
   ENSEMBL-UP (3)   
Protein sequence (1)   
   RefSeq(pep) (1)   
Protein domain (19)   
   InterPro (10)   
   Pfam (5)   
   PROSITE (2)   
   SMART (2)   
All databases (29)   

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ID   A0A1S3RG42_SALSA        Unreviewed;      1159 AA.
AC   A0A1S3RG42;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   27-MAR-2024, entry version 31.
DE   SubName: Full=Integrin alpha-X-like isoform X1 {ECO:0000313|RefSeq:XP_014051186.1};
GN   Name=LOC106602819 {ECO:0000313|RefSeq:XP_014051186.1};
OS   Salmo salar (Atlantic salmon).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC   Salmonidae; Salmoninae; Salmo.
OX   NCBI_TaxID=8030 {ECO:0000313|Proteomes:UP000087266, ECO:0000313|RefSeq:XP_014051186.1};
RN   [1] {ECO:0000313|RefSeq:XP_014051186.1}
RP   IDENTIFICATION.
RC   TISSUE=Muscle {ECO:0000313|RefSeq:XP_014051186.1};
RG   RefSeq;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004479,
CC       ECO:0000256|RuleBase:RU003762}; Single-pass type I membrane protein
CC       {ECO:0000256|ARBA:ARBA00004479, ECO:0000256|RuleBase:RU003762}.
CC   -!- SIMILARITY: Belongs to the integrin alpha chain family.
CC       {ECO:0000256|ARBA:ARBA00008054, ECO:0000256|RuleBase:RU003762}.
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DR   RefSeq; XP_014051186.1; XM_014195711.1.
DR   AlphaFoldDB; A0A1S3RG42; -.
DR   STRING; 8030.ENSSSAP00000049665; -.
DR   PaxDb; 8030-ENSSSAP00000049665; -.
DR   Ensembl; ENSSSAT00000241246; ENSSSAP00000162655; ENSSSAG00000049715.
DR   GeneID; 106602819; -.
DR   KEGG; sasa:106602819; -.
DR   OMA; ACGPTWE; -.
DR   OrthoDB; 3816176at2759; -.
DR   Proteomes; UP000087266; Chromosome ssa04.
DR   Bgee; ENSSSAG00000049715; Expressed in zone of skin and 14 other cell types or tissues.
DR   GO; GO:0008305; C:integrin complex; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
DR   GO; GO:0007229; P:integrin-mediated signaling pathway; IEA:UniProtKB-KW.
DR   Gene3D; 1.20.5.930; Bicelle-embedded integrin alpha(iib) transmembrane segment; 1.
DR   Gene3D; 2.130.10.130; Integrin alpha, N-terminal; 1.
DR   Gene3D; 2.60.40.1460; Integrin domains. Chain A, domain 2; 1.
DR   Gene3D; 2.60.40.1510; ntegrin, alpha v. Chain A, domain 3; 1.
DR   Gene3D; 2.60.40.1530; ntegrin, alpha v. Chain A, domain 4; 1.
DR   Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR   InterPro; IPR013517; FG-GAP.
DR   InterPro; IPR013519; Int_alpha_beta-p.
DR   InterPro; IPR000413; Integrin_alpha.
DR   InterPro; IPR013649; Integrin_alpha_Ig-like_1.
DR   InterPro; IPR048285; Integrin_alpha_Ig-like_2.
DR   InterPro; IPR028994; Integrin_alpha_N.
DR   InterPro; IPR032695; Integrin_dom_sf.
DR   InterPro; IPR048633; ITGAX-like_Ig_3.
DR   InterPro; IPR002035; VWF_A.
DR   InterPro; IPR036465; vWFA_dom_sf.
DR   PANTHER; PTHR23220; INTEGRIN ALPHA; 1.
DR   PANTHER; PTHR23220:SF84; INTEGRIN ALPHA-L; 1.
DR   Pfam; PF01839; FG-GAP; 1.
DR   Pfam; PF08441; Integrin_A_Ig_1; 1.
DR   Pfam; PF20805; Integrin_A_Ig_2; 1.
DR   Pfam; PF21520; ITGAX-like_Ig_3; 1.
DR   Pfam; PF00092; VWA; 1.
DR   PRINTS; PR01185; INTEGRINA.
DR   PRINTS; PR00453; VWFADOMAIN.
DR   SMART; SM00191; Int_alpha; 5.
DR   SMART; SM00327; VWA; 1.
DR   SUPFAM; SSF69318; Integrin alpha N-terminal domain; 1.
DR   SUPFAM; SSF69179; Integrin domains; 2.
DR   SUPFAM; SSF53300; vWA-like; 1.
DR   PROSITE; PS51470; FG_GAP; 4.
DR   PROSITE; PS50234; VWFA; 1.
PE   3: Inferred from homology;
KW   Calcium {ECO:0000256|ARBA:ARBA00022837};
KW   Cell adhesion {ECO:0000256|ARBA:ARBA00022889,
KW   ECO:0000256|RuleBase:RU003762};
KW   Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW   Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW   Integrin {ECO:0000256|ARBA:ARBA00023037, ECO:0000256|RuleBase:RU003762};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU003762};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Receptor {ECO:0000256|ARBA:ARBA00023170, ECO:0000256|RuleBase:RU003762};
KW   Reference proteome {ECO:0000313|Proteomes:UP000087266};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Signal {ECO:0000256|ARBA:ARBA00022729};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW   ECO:0000256|RuleBase:RU003762};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|RuleBase:RU003762}.
FT   TRANSMEM        1091..1113
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU003762"
FT   REPEAT          34..90
FT                   /note="FG-GAP"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
FT   DOMAIN          159..331
FT                   /note="VWFA"
FT                   /evidence="ECO:0000259|PROSITE:PS50234"
FT   REPEAT          448..511
FT                   /note="FG-GAP"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
FT   REPEAT          512..570
FT                   /note="FG-GAP"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
FT   REPEAT          574..636
FT                   /note="FG-GAP"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00803"
SQ   SEQUENCE   1159 AA;  124713 MW;  4CA0FA65DD359974 CRC64;
     MDNKLEHIQF WCLLGLLQFA PLTVGFSFDI RYPRTLSVPD SEAAGSHFGY RVCQFGPAQG
     DSSVLVTAPF QDNGTGVVYG CSYDSGTCKA LPVQVEPGVS LGLSLACNAD RAMVCGPRRI
     HGCDTLNYLQ GLCVELGPQL TVSQTLKPAF QECREFGLDA VILFDGSQSI ITRDFVTMID
     FIKNIIRMFT APRTQVAVAQ YSTDTSAVFH FEDFVSDPNP DTLMRSVDHF QEATYTPSAI
     RYVLEQMMTE ERGMRKHSRK LLVVITDGKS NDPKETFNSV IPLAEMKAVI RFAIGVGKQF
     SRQELEEIAS FPNFVFETNS FDALKSIQNE LREKIFAIEG TNSTNSRSFK QELSQGGFST
     TLSGGVSLFG AVGSYSWSGG IVEAARGVNA TFINASALET DMQNSYLGYS VAVAETVNGS
     IYFAGAPRFN HTGLVLVFQR DPLQQEWTVT HRIPGSQLGS YFGAELCVLE SHAGPGEGRA
     GLLVVGAPWY HTQDVGGEVH VCTLETGAPN CSLTLRGVQG NVHGQFGTSL SPCPDLNGDG
     LPELAVGAPL EDRGHGSVYI FLGRPWGIQA KYSQRIQGVS GRAGRGLQFF GVSVHSAGDL
     NSDGLADMVV GAKGAAFILR SQPVMRVLVS VTMDPPMISQ NSFHCAGPMA LNTPVTTATL
     CVTVSGAHVG NIQASLQASV SVTVDLLEDQ TRTRPARLLF YPRSTSSSWD ETVTGTACHN
     FSLSIPECIS DYREVPLSVQ MAVEGQEVPG TGGLKSVLSP DNPTSFAHMI LLEKVCGEDH
     VCVSDLSVNV TSPEVVCSQG FPVEVSVEVA NSGEDSSEAQ LTLVHPSSIT FIRAKRPSGP
     GQVAVWCVSN TTGLENITHT VCPLSSTVLR QGARVTVLMS FTVFEPSCMR ERLALNVFVT
     TDNEGQGTLQ DNYASSSVDV KLPINIVVKG GYSSQYITFP DNKLLEHIYM VENIGNVAAP
     VNVTFVIPVE LASGYLWNVS LLQTDNSRGK CERKEVFSKQ EKNTLFYQHC SGVICHLVGC
     TIGLSSNNQP TIFKFVGNIS RSSEGSAVQV EVVSWGSLSF DQSVYSQYPA IGSQSVKILS
     ILETTPESHT ALIASISVVF SLLLLTIISG VLYKKGFFKS RRIASGGVDY SSAVPGRTAA
     PGDDHGLTSD ITSLGKNTL
//

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