ID A0A1S3RT14_SALSA Unreviewed; 964 AA.
AC A0A1S3RT14;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Protocadherin gamma-A3-like isoform X9 {ECO:0000313|RefSeq:XP_014055450.1};
GN Name=LOC106604876 {ECO:0000313|RefSeq:XP_014055450.1};
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030 {ECO:0000313|Proteomes:UP000087266, ECO:0000313|RefSeq:XP_014055450.1};
RN [1] {ECO:0000313|RefSeq:XP_014055450.1}
RP IDENTIFICATION.
RC TISSUE=Muscle {ECO:0000313|RefSeq:XP_014055450.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- FUNCTION: Potential calcium-dependent cell-adhesion protein. May be
CC involved in the establishment and maintenance of specific neuronal
CC connections in the brain. {ECO:0000256|ARBA:ARBA00003436}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|ARBA:ARBA00004251};
CC Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004251}.
CC Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane
CC protein {ECO:0000256|ARBA:ARBA00004479}.
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DR RefSeq; XP_014055450.1; XM_014199975.1.
DR AlphaFoldDB; A0A1S3RT14; -.
DR GeneID; 106604876; -.
DR OrthoDB; 4163668at2759; -.
DR Proteomes; UP000087266; Chromosome ssa05.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005509; F:calcium ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0007156; P:homophilic cell adhesion via plasma membrane adhesion molecules; IEA:InterPro.
DR CDD; cd11304; Cadherin_repeat; 6.
DR Gene3D; 2.60.40.60; Cadherins; 6.
DR InterPro; IPR002126; Cadherin-like_dom.
DR InterPro; IPR015919; Cadherin-like_sf.
DR InterPro; IPR032455; Cadherin_C.
DR InterPro; IPR031904; Cadherin_CBD.
DR InterPro; IPR020894; Cadherin_CS.
DR InterPro; IPR013164; Cadherin_N.
DR PANTHER; PTHR24028; CADHERIN-87A; 1.
DR PANTHER; PTHR24028:SF296; PROTOCADHERIN DELTA 1; 1.
DR Pfam; PF00028; Cadherin; 5.
DR Pfam; PF08266; Cadherin_2; 1.
DR Pfam; PF16492; Cadherin_C_2; 1.
DR Pfam; PF15974; Cadherin_tail; 1.
DR PRINTS; PR00205; CADHERIN.
DR SMART; SM00112; CA; 5.
DR SUPFAM; SSF49313; Cadherin-like; 6.
DR PROSITE; PS00232; CADHERIN_1; 3.
DR PROSITE; PS50268; CADHERIN_2; 6.
PE 4: Predicted;
KW Calcium {ECO:0000256|ARBA:ARBA00022837, ECO:0000256|PROSITE-
KW ProRule:PRU00043}; Cell adhesion {ECO:0000256|ARBA:ARBA00022889};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000087266};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 692..717
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 82..138
FT /note="Cadherin"
FT /evidence="ECO:0000259|PROSITE:PS50268"
FT DOMAIN 139..247
FT /note="Cadherin"
FT /evidence="ECO:0000259|PROSITE:PS50268"
FT DOMAIN 248..352
FT /note="Cadherin"
FT /evidence="ECO:0000259|PROSITE:PS50268"
FT DOMAIN 353..457
FT /note="Cadherin"
FT /evidence="ECO:0000259|PROSITE:PS50268"
FT DOMAIN 458..567
FT /note="Cadherin"
FT /evidence="ECO:0000259|PROSITE:PS50268"
FT DOMAIN 582..679
FT /note="Cadherin"
FT /evidence="ECO:0000259|PROSITE:PS50268"
FT REGION 800..849
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 903..964
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 903..937
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 964 AA; 106418 MW; CB2C227B6552FFDB CRC64;
MEFKGFRQPT TWRLCGLQWQ VHIFLLYLSH VVCGQIRYSI PEEMKKGSLI GNVAQDLGLD
LKRLRAGRAR IVTGESIQYT ELKTDKGILV VSERIDREQL CGDVTPCSFS FEMILENPME
LHRITVEILD VNDHAPAFPN KYIHFEISES ATVGSRFLLE SAEDNDVGLN ALQNYILTPN
DNFILKQHTN PDGSKYAEMV LQKPLDREEN PRLSLKLIAV DGGNPQRSGS VNIEITVLDA
NDNAPVFNQS VYRATVMENA LKSTYITTVN ASDADSGSNG YISYMFSNLK GTVSETFTID
ANTGVISVLG EIDYEKYKKY EIRIDATDQG GLTDSSKVIV EVIDVNDNEP VISVMSFTSP
ISEDSPHGTT IGIINVKDLD SGENGQVSCS IDQNIPFNIK SNVRNYYTLV TGAVLDRESV
SEYNITVVAT DAGSPPLSSR RTFHLKVSDV NDNAPVFPQV VYNSYVAENN SPGVSIFTVT
AKDTDSNQNA RISYILEDSD VSGTPVSVYV SVNAESGVIH AVRSFDYEQM KQLRLVVKAQ
DGGSPPLSSN VTVIIFIQDQ NDNAPQVLYP VQTSSSLVAE MVPRSADVGY LVTKVVAVDV
DSGQNAWLSY KLQKATDRAL FEVGLQNGEI RTIRQVTDKD AVKQRLTVVV EDNGQPSRSA
TVNVNVAVAD SFPEVLSEFT DFTHDKEYND NLTFYLVLAL AVVSFLFITC LVVIISVKIY
RWRQSRILYH SNLPVIPYYP PRYADTLGTG TLQHVYNYEV CRTTDSRKSD CQFARPCSQN
VLIMDPSSTG TMQRIQNEKN ILDEPDSPLE QKPPNADWRF TQGQRPGPSG AGGPPEMAMG
TGPWPNPPTE AEQLQALMAA ANEVSEATAT LGPGTMGLST RYSPQFTLQH VPDYRQNVYI
PGSTATLTSN PQQQQQQQML MQQQMAAQHQ ALQAQPSEAA AQPEPPKPAQ TPASKKKSTK
KEKK
//