ID A0A1S3VKZ9_VIGRR Unreviewed; 727 AA.
AC A0A1S3VKZ9;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=Ribosome biogenesis protein BOP1 homolog {ECO:0000256|HAMAP-Rule:MF_03027};
GN Name=LOC106776192 {ECO:0000313|RefSeq:XP_014519053.1};
OS Vigna radiata var. radiata (Mung bean) (Phaseolus aureus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna.
OX NCBI_TaxID=3916 {ECO:0000313|Proteomes:UP000087766, ECO:0000313|RefSeq:XP_014519053.1};
RN [1] {ECO:0000313|RefSeq:XP_014519053.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_014519053.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- FUNCTION: Required for maturation of ribosomal RNAs and formation of
CC the large ribosomal subunit. {ECO:0000256|HAMAP-Rule:MF_03027}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000256|HAMAP-
CC Rule:MF_03027}. Nucleus, nucleoplasm {ECO:0000256|HAMAP-Rule:MF_03027}.
CC -!- SIMILARITY: Belongs to the WD repeat BOP1/ERB1 family.
CC {ECO:0000256|HAMAP-Rule:MF_03027}.
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DR RefSeq; XP_014519053.1; XM_014663567.2.
DR AlphaFoldDB; A0A1S3VKZ9; -.
DR STRING; 3916.A0A1S3VKZ9; -.
DR GeneID; 106776192; -.
DR KEGG; vra:106776192; -.
DR OrthoDB; 5472008at2759; -.
DR Proteomes; UP000087766; Chromosome 10.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IEA:UniProtKB-UniRule.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR HAMAP; MF_03027; BOP1; 1.
DR InterPro; IPR028598; BOP1/Erb1.
DR InterPro; IPR012953; BOP1_N_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR17605:SF0; RIBOSOME BIOGENESIS PROTEIN BOP1; 1.
DR PANTHER; PTHR17605; RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN; 1.
DR Pfam; PF08145; BOP1NT; 1.
DR Pfam; PF00400; WD40; 3.
DR SMART; SM01035; BOP1NT; 1.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|HAMAP-Rule:MF_03027};
KW Reference proteome {ECO:0000313|Proteomes:UP000087766};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517, ECO:0000256|HAMAP-
KW Rule:MF_03027};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552, ECO:0000256|HAMAP-
KW Rule:MF_03027};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 128..383
FT /note="BOP1 N-terminal"
FT /evidence="ECO:0000259|SMART:SM01035"
FT REPEAT 390..431
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 1..126
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..21
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..53
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 86..104
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 727 AA; 82621 MW; B6844C84FF1D6A0E CRC64;
MKGKKKTMAK NDVHEEEAPF PSEKLPSPSV SDSDSDSDYE DSSADDDESS VSLDSQSESE
FEEGSPENGR SGDSEAEGTE SSIDEDIVNG EGSGNESSDL HQQGAESDSS EDEVAPRNTI
GDVPLKWYED EPHIGYDIKG KKIKKKEKQD KLDSFLANVD DSKSWRKIYD EYNDEVVELT
KDEIKLVRRL LKNQAPHSDF DPYPDYVDWY KWEDAKHPLS NAPEPKRRFI PSKWEAKKVV
QYVRAIRKGT ITFDKPKEED GPYLLWGDDS GSTEKSNHLA YIPAPKQKLP GHDESYNPPL
EYIPTQEEIN SYQLMFEEDR PKFIPKRFTS MRSIPSYENA MKESFERCLD LYLCPRVRKK
RLNIDPESLK PKLPSRKELK PYPITCYIEY KGHEDAVTSI SIEASGQWMA SGSSDGTVRV
WEVETGRCLR RWEVGEGVSC VSWNPLPDMH ILAVSAGQDV LLLNTGLGDE ELQNQIKELL
WIDSSTTSDD SGDKAPSVSW LKDDKHMGLR LRHFKTVTAV EWHRKGDYFS TVMPTGESRA
VLIHQLSKKL TQKLPFKLHG LAVRSTFHPS RSIFFVCTKK TVRVYDLLKT KLIKKLDTGL
REASSIAVHP GGDNLIVGSK EGKMCWFDMD LSSKPYKILK CHPKDINNVI FHRTYPLFAS
CSDDCTAYVF HGMVYSDLNQ NPLIVPLEIL RGHTSSNGRG ILDCKFHPRQ PWLFTAGADK
LIKLYCH
//
