ID A0A1S3YB31_TOBAC Unreviewed; 970 AA.
AC A0A1S3YB31;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=Chaperone protein ClpD, chloroplastic-like isoform X1 {ECO:0000313|RefSeq:XP_016449420.1};
GN Name=LOC107774412 {ECO:0000313|RefSeq:XP_016449420.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016449420.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016449420.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR RefSeq; XP_016449420.1; XM_016593934.1.
DR AlphaFoldDB; A0A1S3YB31; -.
DR SMR; A0A1S3YB31; -.
DR STRING; 4097.A0A1S3YB31; -.
DR PaxDb; 4097-A0A1S3YB31; -.
DR GeneID; 107774412; -.
DR KEGG; nta:107774412; -.
DR OrthoDB; 275944at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF185; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000084051};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 97..252
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT REGION 586..610
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 592..606
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 970 AA; 106414 MW; 7431B2CF8020D27A CRC64;
MELTCSSPLS VNSTISFNSQ LRRYVSAYPH KRCQTVFSLF PYCPSSSSHI TTTTTTTATT
ATSSSTSSLF GISLSHRPCN SIPRKIKRSL YIVSGVFERF TERSIKAVMF SQKEAKALGK
DMVYTQHLLL GLIAEDRSPG GFLGSRITID KAREAVRSIW HDDVEDDKAK LASQDSGSAT
SATDVAFSSS TKRVFEAAVE YSRTMGHNFI APEHIAFGLF TVDDGNATRV LKRLGVNVNR
LAAEAVSRLQ GELAKDGREP ISFKRSRDKS FPGKITIDRS AEKANAEKNA LEQFCVDLTA
RASEGLIDPV IGRETEVQRI IEILCRRTKN NPILLGQAGV GKTAIAEGLA INIAEGNIPA
FLMKKRVMSL DIGLLISGAK ERGELEGRVT TLIKEVKKSG NIILFIDEVH TLVGAGTVGR
GNKGSGLDIA NLLKPALGRG ELQCIASTTM DEFRLHIEKD KAFARRFQPV LINEPSQADA
VQILLGLCEK YESHHKCRYS LDAINAAVQL SARYIPDRYL PDKAIDLIDE AGSKSRMQAH
KRRKEQQVSV LSQSPSDYWQ EIRAVQAMHE VQILASKLTE NDDASCLNDD SELHLQPASS
STSDEDEPPV VGPEEIAAVA SLWTGIPLKQ LTVDERMLLV GLDEQLRKRV VGQDEAVTAI
CRAVKRSRTG LKDPNRPISA MLFCGPTGVG KSELAKALAA SYFGSESAML RLDMSEYMER
HTVSKLIGSP PGYVGYGEGG TLTEAIRRKP FTVVLLDEIE KAHPDIFNIL LQLFEDGHLT
DSQGRRVSFK NALIVMTSNV GSTAIVKGRQ NTIGFLLADD ESAASYAGMK AIVMEELKTY
FRPELMNRLD EVVVFRPLEK PQMLQILDLM LQEVRARLVS LEISLEVSEA VMELICQQGF
DRNYGARPLR RAVTQMVEDL LSESLLSGDL KPGDVAIINL DESGNPVVAN KSTQSIHLSD
ANGNPVVTNR
//