ID A0A1S3YD13_TOBAC Unreviewed; 436 AA.
AC A0A1S3YD13;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=Cleavage stimulation factor 50 kDa subunit {ECO:0000256|ARBA:ARBA00029851};
GN Name=LOC107774759 {ECO:0000313|RefSeq:XP_016449888.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016449888.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016449888.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR RefSeq; XP_016449888.1; XM_016594402.1.
DR AlphaFoldDB; A0A1S3YD13; -.
DR GeneID; 107774759; -.
DR OrthoDB; 20847at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0005848; C:mRNA cleavage stimulating factor complex; IEA:InterPro.
DR GO; GO:0031124; P:mRNA 3'-end processing; IEA:InterPro.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR044633; CstF1-like.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR44133; CLEAVAGE STIMULATION FACTOR SUBUNIT 1; 1.
DR PANTHER; PTHR44133:SF2; CLEAVAGE STIMULATION FACTOR SUBUNIT 1; 1.
DR Pfam; PF00400; WD40; 5.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000084051};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 123..164
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 179..220
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 269..310
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 325..354
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 436 AA; 48172 MW; 09E3056016606E5A CRC64;
MESNNSLEQT LQDGKLYRHV NSLIVAHLRD NNLNQAASAV ASATMTPMNV EAPTKKLLEL
VAKGLAVEKD ETLRGVSTAA PFDPVITTGY GSIPAPRTAS VDFSVNDTKG SSKIIPKHES
RHVSEHKNVA RCARFSPDGR FLATGSADTS IKLFEISKVK QMMQPDARDG PVRPVVRTFY
DHQQPINDLD FHPQNTVLIS GAKDRTIKFF DFSKTVAKRA FRVIQDTHNV RSVSFHPSGD
FLLAGTDHLI PHLYDINTFK CYLPTNFQEM GVNGAINQVR YSSTGGMYVT ASKDGAIRLW
DGVTASCARS IDGAHGAAEA IGANFTKDER YILSCGKDSS VKLWEVGTGR LVKQYLGATH
TQLRCQAIFN DTEEFVLSID ESLNEIVAWD ALTAEKVARW PSNHVGAPRW LEHSRVEAAF
VSCGMDRSIR YWKEVL
//
