ID A0A1S3YJV1_TOBAC Unreviewed; 3244 AA.
AC A0A1S3YJV1;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Chromatin structure-remodeling complex protein SYD-like isoform X3 {ECO:0000313|RefSeq:XP_016452514.1};
GN Name=LOC107777060 {ECO:0000313|RefSeq:XP_016452514.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016452514.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016452514.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016452514.1; XM_016597028.1.
DR GeneID; 107777060; -.
DR OrthoDB; 1221768at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0042393; F:histone binding; IEA:InterPro.
DR CDD; cd17996; DEXHc_SMARCA2_SMARCA4; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR014012; HSA_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR029295; SnAC.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR10799:SF973; ATP-DEPENDENT HELICASE BRM; 1.
DR PANTHER; PTHR10799; SNF2/RAD54 HELICASE FAMILY; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF14619; SnAC; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM01314; SnAC; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51204; HSA; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000084051}.
FT DOMAIN 668..742
FT /note="HSA"
FT /evidence="ECO:0000259|PROSITE:PS51204"
FT DOMAIN 862..1029
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1173..1319
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 154..204
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 218..241
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 319..385
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 412..500
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1428..1459
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1508..1578
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1649..1744
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1794..1863
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1957..2084
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2270..2300
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2347..2400
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2605..2668
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2824..2881
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2914..3041
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 3074..3101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 3129..3244
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 656..683
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 155..179
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 227..241
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 339..369
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 370..385
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 422..472
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1528..1562
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1697..1732
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1794..1814
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1826..1863
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1973..1987
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2000..2015
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2058..2075
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2270..2286
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2351..2400
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2619..2665
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2935..2959
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 3004..3039
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 3086..3101
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 3137..3151
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 3180..3212
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 3244 AA; 352461 MW; 55283535F7408802 CRC64;
MANPNNVELE AAKFLHKLIQ ESKDEPTKLA TKLYVILQHM RSSGKENSMP YQVISRAMET
VVKQHGLDIE ALMSSRLPMS AGVQVGEAAS SQVAGSSQRA GVTRESKANL LGNEMVKPDA
YASNSAVSGP SGSGHGIYQA SAPHISGTGV KVPVMAPSAS NSSQPVEPGI SSPVQFGSPS
IDNHGYAAKL HKDGSTEPFS GSTSVDLVAG RTAAGRALEH EGGSSMLGNA SKISQGGMAN
NVPEKSMLRS ETIRDAGKLP VAAQAPVSAM PFKEHHLKQL RAQCLVFLAF RNGLMPKKLH
LEIALGNFYP KEGREQLLTD QSSASEVTRP LGGAGETDRL SSGPTSSGVL ADTNPSMEAE
NANLMEDKSS QLDPSEHADE RRPQRKMRMI QDAEVPIQDA TESQASALRG VPIDSKPLAP
NNHEHASANT EQLGMFPQAS SVTGTSMQMK PDLSGWSGTE ASKVSPPASA NTHESGLLMK
DCPADSNAQG NRHADSNLPS LPLRQQWKSV PGAINQSPVT MQVKDSNIML KNLSQVQETD
QEDENISAST DRLLSPRHTM MEKWILDRQK RKHLSEQKWS EKQQKAEKRI ASCAEKLKES
VSSSEDISAK TKSVIELKKL QLLELQRRLR SEILNDFFKP IAADMERLKS IKKHRIGRKS
KQLERYEQKM KEERQKRIRE RQKEFFSEIE VHRERLEDVF KMKRERWKGF NKYVKEFHKR
KERIHREKID RIQREKINLL KINDVEGYLR MVQDAKSDRV KQLLKETEKY LQQLGSKLKD
AKSIARKFDT DMGDNRNTGV VEEDEIDFGD EDETDQAKHY LESNEKYYMM AHSVKETIAE
QPTSLKGGKL REYQMNGLRW LVSLYNNHLN GILADEMGLG KTVQVISLMC YLMEAKNDRG
PFLVVVPSSV LPGWESEINF WAPDMLKIVY SGPPEERRKL FKERIVHQKF NVLLTTYEYL
MNKHDRPKLS KIHWHYIIID EGHRIKNASC KLNADLKHYR SNHRLLLTGT PLQNNLEELW
ALLNFLLPNI FNSSEDFSQW FNKPFESNGD NSADEALLSE EENLLIINRL HQVLRPFVLR
RLKHKVENEL PEKIERLVRC EASSYQKLLM KRVEENLGAF GTSKARSVHN SVMELRNICN
HPYLSQLHVE EIHELIPKHY LPNIVRICGK LEMLDRLLPK LKATDHRVLL FSTMTRLLDV
MEDYLCWKEY KYLRLDGHTS GGDRGALIDR FNQPNSPFFI FLLSIRAGGV GVNLQAADTV
ILFDTDWNPQ VDLQAQARAH RIGQKKDVLV LRLETVQTVE EQVRAAAEHK LGVANQSITA
GFFDNNTSAE DRREYLESLL RESKKEEAAP VLDDDSLNDL IARSEPEIDI FESIDRKRRE
EEMEVWKKLC SESVTQSSEP IPPLPSRLLT DEDLKPFYEA MKIDDKPAVA PNPGLKRKGE
SLGGLDIQHY GRGKRTREVR SYEEQWTEEE FEKMCLAESP QSPILREEIQ EKKFLPVSGS
CPAPVVAISE ILTPAPDQPP PQQPAQELPQ QPAQELPQQP AQELPQQLVG PIVQQSPVTV
TPPSKRGRGR PRRTAIVTEI SPSPVVLSAT AAVKVDSISV AENTSTSQAT SGPVSVSIPC
ASSVESTSAT ILGSATAVAP CHQPVVPSVA SLSGPPCPPT IGQGRGRGRG RGRGRGRGRK
VENGGEAPGR RGKRQSVTTE AFLSPPTQAI SESVSAAQGV NVLSSSSHHM PPTPPSTGKP
DLVPQVVAGL GSKVLGHAPA SVRDANKELN SVSMMPLASS STSKEVISVS TVPVIPSSSS
SQDPSSISPA VHSSSKNHSE DHRSFSAAQT EATPQANAIS VVPHTSPSAG TEPSSATPGP
LLTFTSKDSG SVLPAPVPAS SSACMELSSV CPVPAVASSC SSMGPTSSAP APLLLASNAT
GKLDSGSDKG TFSCSSAISG HDDSLCDSSI LKNIGQGDSG VGTGHTSDPV PPLPAISSVS
QYSTPPTAPK PGRGRGRKPQ TGSEPPRRRG KRQDLITTTV TEGLGAQDPR SIEPPQKRTR
LSVGRKPTTR SKRENEAQQV VVDQSVASQR TPDFSGQIPK DMVRSEVDPQ NNAINRDASQ
SHAILVPGQV GDNVNPDTAT AEKVLDDAQR KATVIQSVAP QSCSGPPIEL QINMVNSGDS
PAQEQTAIVQ SDASQMIPDP SARPIPQAMV RSEVELHRNA IKSDASQSSG HVAERVDTVN
ISCGAAPTKE VLSEDQQIMK VQSAASQTPS VLSVGKIPED IAFNEVQPQS DAIQTDPSSH
VTLSSAGVDN LKEKENAMTR EIPLVTPLSE TKEEGYSRSK YDSHPNLPVS CDELAVSTSG
SMAQVSDCLV EESEGDSKGE GAEKSETNSK GEGGKIEAMN DKCESDSKNE NDEKESGRCM
KAGESQASSL CYVEPTLVQI HVSNCTNAAL LDKGGSCKTS LAGKSGANMA AEKDVDQLQT
EDLSHDKSFV SKTEVASIES RADGGLTKEQ ETGDTIEEET VVSPAVGTDS QNMKGITSFA
SPSTETEALV DVHQEDKVEV SGEGTHSDKV VMAKVCEQDK LSVNASLEIT KNLSRVEEEK
SLTPETFEKQ ANVADSLTEK CESDLAAQDP DMKNSDVSEV ALSPRNESRS SLTGGTSQRE
PEQQAITEAN LHPETLRSTE SGAREESLSL RIASHPEAVE APKETFCSNH DTNCVAELQG
NMSSDVKEGL FNSEANVSQL CPAVGSSENH PELKQVMVED MRTKICAESA SHEVDDIVPP
QTEKAGVQCR DDLSVETNEG RRSEDNVDVL NGELKKPLSS TIAGTSEKVA DLQLVAEENT
VRINDGSIDS GQVAEKSKDI SIQDLTVEGQ ETKGSDAAED TSTSNSTFSE PQRSAGTSKN
EVVSQFSALQ NIEKMYSESV ASGEVTAPKP LIKKSQSLHV QDPVDKGFDA TGDVSKSLSE
LNEAQPGGTS QIELQLVAEE NSETRNKEDG LPDATAVKPP PCNSENLGIQ DPAHQEPENQ
RSDTTEEFST LNVELNESQP EAADGTSEIV ESNSVSKQDM EIPEEVATVD VTAENAAVGK
SKNFPSIDVA VEGKGNKESD VIDEISNSEL SEPKSSQSTI NVETHLICDE WGMTDKEVAP
LEVEVVETPC RDFPGCSGRD LEVEGQEEKK STASKNVSNP ESKEPKGSPG ARAADNGAKS
QLVAQRNSET ALSKEVFSGK EENSSIKQGG DEDVSTATEY GDEELSSATG AGDDKTVSPA
VTDA
//
