ID A0A1S3ZJF2_TOBAC Unreviewed; 515 AA.
AC A0A1S3ZJF2;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Uncharacterized protein LOC107787450 {ECO:0000313|RefSeq:XP_016464544.1};
GN Name=LOC107787450 {ECO:0000313|RefSeq:XP_016464544.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016464544.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016464544.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016464544.1; XM_016609058.1.
DR AlphaFoldDB; A0A1S3ZJF2; -.
DR SMR; A0A1S3ZJF2; -.
DR STRING; 4097.A0A1S3ZJF2; -.
DR PaxDb; 4097-A0A1S3ZJF2; -.
DR GeneID; 107787450; -.
DR KEGG; nta:107787450; -.
DR OMA; PMENDRA; -.
DR OrthoDB; 728962at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000084051}.
FT DOMAIN 1..74
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 330..435
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 515 AA; 58797 MW; 47556B789432C634 CRC64;
MATYQRLVAK MFKEQLGKTM KVYIDDMVVK SKKKEDYIGH LKEAFEILRR YGMKLNPGKC
TFGITLGKFL GFLVSQRGIE VNPDQIRAIE GISETLTSKK RVQKLTGRIT TLSRFISRSS
DRCHKFFNVL RKDHELQWNS ECVDALIKLK AYLSSPPLLV KADPGECLLV YLAVFEVAIP
RAQNIEADGR AKLATSTKNI NKENVVTLLH SSIDQVEVHS VKLTWDWRNR IVTYLQVGML
SQDKKEAKKL RIQAARYNLI NCDLYKRTFG VPLAKCLGPN QIRRVLEEVH EGHYGAHTGN
RALVVVGAYT QIHEQEVIAF IWKNIICRFG IPTEISCDSG PQFVGKKTTE FFEKWHTKRI
LSTPYHPAGN SQAESSNKVI LNILKKKLEG LWPELLLEVL WAYRTIPKTR TSETPYSLLY
GTDAVIPVEV GEPSLRYSNE SEPSNDESRL QDLNEVEERR DMAHEAPPKP YSYSPIWVFS
QSGFLGEVFN EAARGTFEVR SIVHYPACRR DLQAE
//
