UniProt: A0A1S4AIR3

Database: UniProt
Entry: A0A1S4AIR3_TOBAC

LinkDB:  A0A1S4AIR3_TOBAC 
Original site:  A0A1S4AIR3_TOBAC

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Ontology (3)   
   GO (3)   
Gene (2)   
   KEGG GENES (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
Protein domain (5)   
   InterPro (2)   
   Pfam (1)   
   PROSITE (1)   
   SMART (1)   
Literature (1)   
   PubMed (1)   
All databases (16)   

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ID   A0A1S4AIR3_TOBAC        Unreviewed;       427 AA.
AC   A0A1S4AIR3;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   27-MAR-2024, entry version 28.
DE   SubName: Full=Zinc finger CCCH domain-containing protein ZFN-like isoform X1 {ECO:0000313|RefSeq:XP_016476583.1, ECO:0000313|RefSeq:XP_016476584.1};
GN   Name=LOC107798134 {ECO:0000313|RefSeq:XP_016476583.1,
GN   ECO:0000313|RefSeq:XP_016476584.1, ECO:0000313|RefSeq:XP_016476585.1,
GN   ECO:0000313|RefSeq:XP_016476586.1, ECO:0000313|RefSeq:XP_016476587.1};
OS   Nicotiana tabacum (Common tobacco).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC   Nicotiana.
OX   NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016476587.1};
RN   [1] {ECO:0000313|Proteomes:UP000084051}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX   PubMed=24807620; DOI=10.1038/ncomms4833;
RA   Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA   Goepfert S., Peitsch M.C., Ivanov N.V.;
RT   "The tobacco genome sequence and its comparison with those of tomato and
RT   potato.";
RL   Nat. Commun. 5:3833-3833(2014).
RN   [2] {ECO:0000313|RefSeq:XP_016476583.1, ECO:0000313|RefSeq:XP_016476584.1}
RP   IDENTIFICATION.
RG   RefSeq;
RL   Submitted (NOV-2023) to UniProtKB.
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DR   RefSeq; XP_016476583.1; XM_016621097.1.
DR   RefSeq; XP_016476584.1; XM_016621098.1.
DR   RefSeq; XP_016476585.1; XM_016621099.1.
DR   RefSeq; XP_016476586.1; XM_016621100.1.
DR   RefSeq; XP_016476587.1; XM_016621101.1.
DR   STRING; 4097.A0A1S4AIR3; -.
DR   PaxDb; 4097-A0A1S4AIR3; -.
DR   GeneID; 107798134; -.
DR   KEGG; nta:107798134; -.
DR   OMA; RNEVDCA; -.
DR   OrthoDB; 33612at2759; -.
DR   Proteomes; UP000084051; Unplaced.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   Gene3D; 2.30.30.1190; -; 1.
DR   Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR   InterPro; IPR000571; Znf_CCCH.
DR   InterPro; IPR036855; Znf_CCCH_sf.
DR   PANTHER; PTHR12506; PROTEIN PHOSPHATASE RELATED; 1.
DR   PANTHER; PTHR12506:SF18; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 33-RELATED; 1.
DR   Pfam; PF00642; zf-CCCH; 5.
DR   SMART; SM00356; ZnF_C3H1; 5.
DR   SUPFAM; SSF90229; CCCH zinc finger; 5.
DR   PROSITE; PS50103; ZF_C3H1; 5.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW   ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000084051};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00723}.
FT   DOMAIN          40..68
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50103"
FT   DOMAIN          85..113
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50103"
FT   DOMAIN          131..159
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50103"
FT   DOMAIN          286..314
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50103"
FT   DOMAIN          332..360
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50103"
FT   ZN_FING         40..68
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT   ZN_FING         85..113
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT   ZN_FING         131..159
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT   ZN_FING         286..314
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT   ZN_FING         332..360
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
SQ   SEQUENCE   427 AA;  46673 MW;  8FB4DF326C5A3353 CRC64;
     MDISVSEGPP SLSPSLRQDS LWQMNLRSME SMESGPYPVR EGEPDCSYYI RTGLCRFGST
     CQFNHPPNRK LALAAASMNG EYPERIGQLE CQYYLKTGTC KFGATCKFHH PRDKAGIAGR
     VTLNVLGYPL RPNENECTYY MRTAQCKFGS TCKFHHPEPS NMMVSSRGSP VYPPGPSPTT
     PGQMSYPLSR ASFISGARWQ GSSSYAPLPV LQGVVSFPGF TYNGQLGSVS SAEGQQQTAG
     NSQVYGSSCS SDKATMGSEG MNSSYRVSSL PVGYYALQGE NVFPERVGQP ECQFYMKTGD
     CKFGAVCRFH HPRERLLPPP DCLLSPIGLP LRAGEPMCIF YSRYGICKFG PSCKFDHPMR
     VFTYNISASS STDDPSVRRL LGSSSGTGAL TLTSEGIVEA ASTTPRRLSL LETRKMPPGD
     NNFDREG
//

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