ID A0A1S4BAG5_TOBAC Unreviewed; 635 AA.
AC A0A1S4BAG5;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Factor of DNA methylation 1-like isoform X2 {ECO:0000313|RefSeq:XP_016485878.1, ECO:0000313|RefSeq:XP_016485879.1};
GN Name=LOC107806269 {ECO:0000313|RefSeq:XP_016485878.1,
GN ECO:0000313|RefSeq:XP_016485879.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016485879.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016485878.1, ECO:0000313|RefSeq:XP_016485879.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016485878.1; XM_016630392.1.
DR RefSeq; XP_016485879.1; XM_016630393.1.
DR GeneID; 107806269; -.
DR OMA; FPNQEAE; -.
DR OrthoDB; 1112799at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR Gene3D; 3.30.70.2890; XS domain; 1.
DR InterPro; IPR045177; FDM1-5/IDN2.
DR InterPro; IPR005379; FDM1-5/IDN2_XH.
DR InterPro; IPR005380; XS_domain.
DR InterPro; IPR038588; XS_domain_sf.
DR InterPro; IPR005381; Znf-XS_domain.
DR PANTHER; PTHR21596:SF3; FACTOR OF DNA METHYLATION 1-RELATED; 1.
DR PANTHER; PTHR21596; RIBONUCLEASE P SUBUNIT P38; 1.
DR Pfam; PF03469; XH; 1.
DR Pfam; PF03468; XS; 1.
DR Pfam; PF03470; zf-XS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Reference proteome {ECO:0000313|Proteomes:UP000084051};
KW RNA-mediated gene silencing {ECO:0000256|ARBA:ARBA00023158}.
FT DOMAIN 43..85
FT /note="Zinc finger-XS"
FT /evidence="ECO:0000259|Pfam:PF03470"
FT DOMAIN 115..221
FT /note="XS"
FT /evidence="ECO:0000259|Pfam:PF03468"
FT DOMAIN 502..633
FT /note="Factor of DNA methylation 1-5/IDN2"
FT /evidence="ECO:0000259|Pfam:PF03469"
FT REGION 347..375
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 347..364
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 635 AA; 73972 MW; 93E1F08D62194F10 CRC64;
MSSSSDEEVE LSDSEIYEFK EKPYEELRTG KLRVKGPNGS LRCPFCAGKK KQDYKYKDLL
QHATGVGKGS ANRRAKQKAN HLALAKYLQT DLVNEADPIP ARAVTPERSE PEKTELFRWP
WTGVVVNISK EAANGRSLDD KEYWLRKFSI YMPSEVKFFY DNQARVSEAI VRFNSDWTGF
KSAMEFEKSF EASHCSKQEW KADRSCPGPN IYGWVAREDD YIAEGAIGEY LREKGKLKTI
SDLINEETHD KKKVVANLAN EIDMKNENLD KLQTRFNLNT LSLSQMLEEK DMLHRAFFEE
SRKMQRLARE HVQKVLLEQE MLSVELESKK KKLDAWSREL NKREALTERE KQKLDDEKKQ
NDERNSALQM ASAEQRKADE NVLRLVEEQK REKEEALRKI LELEREIDAR QKLEMEIAEL
KGKLEVMKHL GGNDDAAVQN KIKEMNEELK QKMEEMDDME SLNQTLLAKE RQSNDELQDA
RRTLIDGLKE IVTSGRSQIG IKRMGEIDAK AFQNALKQRL PSAEAEIKAL ELCSLWQENL
KAQDWHPFKT VMVDESHVER MIDENDESLQ KLKEEWGDEI FNAVTTALKE IEEYNPSGRY
IINELWNFKE GRKATLKEVT SYIFKQLKTH KRKRP
//
