ID A0A1S4BAH6_TOBAC Unreviewed; 649 AA.
AC A0A1S4BAH6;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Factor of DNA methylation 1-like isoform X1 {ECO:0000313|RefSeq:XP_016485877.1};
GN Name=LOC107806269 {ECO:0000313|RefSeq:XP_016485877.1};
OS Nicotiana tabacum (Common tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4097 {ECO:0000313|Proteomes:UP000084051, ECO:0000313|RefSeq:XP_016485877.1};
RN [1] {ECO:0000313|Proteomes:UP000084051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TN90 {ECO:0000313|Proteomes:UP000084051};
RX PubMed=24807620; DOI=10.1038/ncomms4833;
RA Sierro N., Battey J.N., Ouadi S., Bakaher N., Bovet L., Willig A.,
RA Goepfert S., Peitsch M.C., Ivanov N.V.;
RT "The tobacco genome sequence and its comparison with those of tomato and
RT potato.";
RL Nat. Commun. 5:3833-3833(2014).
RN [2] {ECO:0000313|RefSeq:XP_016485877.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016485877.1; XM_016630391.1.
DR AlphaFoldDB; A0A1S4BAH6; -.
DR SMR; A0A1S4BAH6; -.
DR STRING; 4097.A0A1S4BAH6; -.
DR PaxDb; 4097-A0A1S4BAH6; -.
DR GeneID; 107806269; -.
DR KEGG; nta:107806269; -.
DR OrthoDB; 1112799at2759; -.
DR Proteomes; UP000084051; Unplaced.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR Gene3D; 3.30.70.2890; XS domain; 1.
DR InterPro; IPR045177; FDM1-5/IDN2.
DR InterPro; IPR005379; FDM1-5/IDN2_XH.
DR InterPro; IPR005380; XS_domain.
DR InterPro; IPR038588; XS_domain_sf.
DR InterPro; IPR005381; Znf-XS_domain.
DR PANTHER; PTHR21596:SF3; FACTOR OF DNA METHYLATION 1-RELATED; 1.
DR PANTHER; PTHR21596; RIBONUCLEASE P SUBUNIT P38; 1.
DR Pfam; PF03469; XH; 1.
DR Pfam; PF03468; XS; 1.
DR Pfam; PF03470; zf-XS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Reference proteome {ECO:0000313|Proteomes:UP000084051};
KW RNA-mediated gene silencing {ECO:0000256|ARBA:ARBA00023158};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..18
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 19..649
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5010328322"
FT DOMAIN 57..99
FT /note="Zinc finger-XS"
FT /evidence="ECO:0000259|Pfam:PF03470"
FT DOMAIN 129..235
FT /note="XS"
FT /evidence="ECO:0000259|Pfam:PF03468"
FT DOMAIN 516..647
FT /note="Factor of DNA methylation 1-5/IDN2"
FT /evidence="ECO:0000259|Pfam:PF03469"
FT REGION 361..389
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 361..378
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 649 AA; 75720 MW; 75E267022BEC3DA0 CRC64;
MYILELILLL YQIQMSSSSD EEVELSDSEI YEFKEKPYEE LRTGKLRVKG PNGSLRCPFC
AGKKKQDYKY KDLLQHATGV GKGSANRRAK QKANHLALAK YLQTDLVNEA DPIPARAVTP
ERSEPEKTEL FRWPWTGVVV NISKEAANGR SLDDKEYWLR KFSIYMPSEV KFFYDNQARV
SEAIVRFNSD WTGFKSAMEF EKSFEASHCS KQEWKADRSC PGPNIYGWVA REDDYIAEGA
IGEYLREKGK LKTISDLINE ETHDKKKVVA NLANEIDMKN ENLDKLQTRF NLNTLSLSQM
LEEKDMLHRA FFEESRKMQR LAREHVQKVL LEQEMLSVEL ESKKKKLDAW SRELNKREAL
TEREKQKLDD EKKQNDERNS ALQMASAEQR KADENVLRLV EEQKREKEEA LRKILELERE
IDARQKLEME IAELKGKLEV MKHLGGNDDA AVQNKIKEMN EELKQKMEEM DDMESLNQTL
LAKERQSNDE LQDARRTLID GLKEIVTSGR SQIGIKRMGE IDAKAFQNAL KQRLPSAEAE
IKALELCSLW QENLKAQDWH PFKTVMVDES HVERMIDEND ESLQKLKEEW GDEIFNAVTT
ALKEIEEYNP SGRYIINELW NFKEGRKATL KEVTSYIFKQ LKTHKRKRP
//
